Factsheet for GSMUA_AchrUn_randomP07580_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P06720_001	Banana	nucleus	44.1	66.89
GSMUA_Achr10P...	Banana	nucleus	45.85	64.42
GSMUA_Achr8P12900_001	Banana	nucleus	40.61	46.04
GSMUA_Achr1P01260_001	Banana	mitochondrion, nucleus, peroxisome, plastid	30.57	45.45
GSMUA_Achr1P03310_001	Banana	nucleus	32.31	44.31
GSMUA_Achr9P03210_001	Banana	nucleus	27.07	44.29
GSMUA_Achr11P...	Banana	nucleus	36.68	43.52
HORVU5Hr1G095320.1	Barley	nucleus	13.1	43.48
HORVU3Hr1G057300.1	Barley	nucleus	13.1	43.48
GSMUA_Achr11P...	Banana	nucleus	37.55	43.43
HORVU4Hr1G082500.1	Barley	nucleus	12.66	42.03
HORVU1Hr1G012760.1	Barley	nucleus	12.66	42.03
GSMUA_Achr11P...	Banana	nucleus	27.51	41.72
HORVU2Hr1G122100.1	Barley	nucleus, plastid	13.97	41.56
GSMUA_Achr6P33180_001	Banana	nucleus	24.02	41.04
GSMUA_Achr11P...	Banana	nucleus	24.45	39.72
GSMUA_Achr10P...	Banana	nucleus	30.57	39.33
GSMUA_Achr5P29140_001	Banana	nucleus	29.69	39.08
GSMUA_Achr8P02630_001	Banana	nucleus	17.03	39.0
GSMUA_Achr5P28550_001	Banana	nucleus	28.82	38.6
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, nucleus	25.33	38.16
HORVU1Hr1G020710.1	Barley	nucleus	12.66	37.66
GSMUA_Achr6P34280_001	Banana	cytosol, mitochondrion, nucleus	17.9	37.27
HORVU5Hr1G095330.1	Barley	nucleus	12.23	36.36
HORVU5Hr1G095390.1	Barley	nucleus	12.23	36.36
Zm00001d051865_P001	Maize	nucleus	46.29	32.12
Os02t0823900-00	Rice	cytosol, nucleus, peroxisome	44.1	29.36
HORVU6Hr1G092750.1	Barley	nucleus	44.98	28.53
TraesCS6A01G404600.1	Wheat	nucleus	44.98	28.07
TraesCS6B01G448900.1	Wheat	nucleus	44.54	27.95
EES07783	Sorghum	nucleus	47.6	27.88
TraesCS6D01G387900.1	Wheat	nucleus	44.54	27.87
GSMUA_Achr10P...	Banana	nucleus	21.83	26.6

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP07580_001	EnsemblPlants:GSMUA_AchrUn_randomT07580_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG07580_001	Gene3D:3.30.160.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0005488	InterPro:IPR013087	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	PANTHER:PTHR26374	PANTHER:PTHR26374:SF329
PFAM:PF13912	PFscan:PS50157	ScanProsite:PS00028	SEG:seg	SMART:SM00355	SUPFAM:SSF57667
UniParc:UPI0002956FBC	UniProt:M0U769	MapMan:15.5.15	:	:	:

Description

Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG07580_001]

Coordinates

chrchrUn_random:-:32465299..32466363

Molecular Weight (calculated)

24698.1 Da

IEP (calculated)

7.259

GRAVY (calculated)

-0.466

Length

229 amino acids

Sequence
(BLAST)

001: MDSVEEGKEY HHHNSSSSSS CNNNDRGARA VVKGKRTKRR RVHLPPASAL AGPTTSSASS AEFSSSITEE DEDMANCLVL LSRGRNCTSL GSAEAAVATT
101: DAKAGACVYE CKTCYKCFPS FQALGGHRAS HKKPRMMSRV HECSICGSEF SSGQALGGHM RRHRPLLTTK ESPELKKESC VLSLDLNLPA PSDGDHEELL
201: ILPPAMTAFP FEGEQPLVFS ATPLVDCHY

Best Arabidopsis Sequence Match ( AT2G28200.1 )
(BLAST)

001: MMMGQDEVGS DQTQIIKGKR TKRQRSSSTF VVTAATTVTS TSSSAGGSGG ERAVSDEYNS AVSSPVTTDC TQEEEDMAIC LIMLARGTVL PSPDLKNSRK
101: IHQKISSENS SFYVYECKTC NRTFSSFQAL GGHRASHKKP RTSTEEKTRL PLTQPKSSAS EEGQNSHFKV SGSALASQAS NIINKANKVH ECSICGSEFT
201: SGQALGGHMR RHRTAVTTIS PVAATAEVSR NSTEEEIEIN IGRSMEQQRK YLPLDLNLPA PEDDLRESKF QGIVFSATPA LIDCHY

Arabidopsis Description

ZAT5Zinc finger protein ZAT5 [Source:UniProtKB/Swiss-Prot;Acc:Q681X4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.