Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr9P03210_001 | Banana | nucleus | 40.43 | 40.71 |
VIT_06s0004g04180.t01 | Wine grape | nucleus | 43.26 | 38.36 |
GSMUA_Achr6P34280_001 | Banana | cytosol, mitochondrion, nucleus | 29.08 | 37.27 |
PGSC0003DMT400060523 | Potato | mitochondrion | 36.17 | 36.96 |
GSMUA_Achr11P... | Banana | nucleus | 38.3 | 35.76 |
Solyc05g054650.1.1 | Tomato | plastid | 37.59 | 34.87 |
VIT_13s0019g00480.t01 | Wine grape | nucleus | 43.26 | 34.66 |
GSMUA_Achr6P33180_001 | Banana | nucleus | 32.62 | 34.33 |
KRG90559 | Soybean | nucleus | 41.84 | 34.1 |
GSMUA_Achr8P02630_001 | Banana | nucleus | 24.11 | 34.0 |
GSMUA_Achr5P28550_001 | Banana | nucleus | 40.43 | 33.33 |
KRH01600 | Soybean | cytosol, extracellular, nucleus | 41.13 | 33.14 |
GSMUA_Achr1P06720_001 | Banana | nucleus | 35.46 | 33.11 |
KRH36195 | Soybean | extracellular | 42.55 | 32.43 |
KRH70509 | Soybean | nucleus | 41.13 | 32.22 |
GSMUA_Achr5P29140_001 | Banana | nucleus | 39.72 | 32.18 |
Solyc05g054660.1.1 | Tomato | nucleus, plastid | 37.59 | 31.74 |
GSMUA_Achr10P... | Banana | cytosol, mitochondrion, nucleus | 34.04 | 31.58 |
GSMUA_Achr10P... | Banana | nucleus | 39.72 | 31.46 |
GSMUA_Achr10P... | Banana | nucleus | 36.17 | 31.29 |
GSMUA_Achr1P01260_001 | Banana | mitochondrion, nucleus, peroxisome, plastid | 34.04 | 31.17 |
GSMUA_Achr11P... | Banana | nucleus | 39.72 | 29.02 |
GSMUA_Achr10P... | Banana | nucleus | 37.59 | 28.19 |
GSMUA_Achr11P... | Banana | nucleus | 39.01 | 27.78 |
GSMUA_Achr1P03310_001 | Banana | nucleus | 31.21 | 26.35 |
GSMUA_Achr8P12900_001 | Banana | nucleus | 37.59 | 26.24 |
PGSC0003DMT400060463 | Potato | nucleus | 36.17 | 24.52 |
GSMUA_AchrUn_... | Banana | nucleus | 39.72 | 24.45 |
Protein Annotations
EnsemblPlants:GSMUA_Achr11P23970_001 | EnsemblPlants:GSMUA_Achr11T23970_001 | EnsemblPlantsGene:GSMUA_Achr11G23970_001 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 |
GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF198 |
PFAM:PF13912 | PFscan:PS50157 | ScanProsite:PS00028 | SEG:seg | SMART:SM00355 | SUPFAM:SSF57667 |
UniParc:UPI00029644B1 | UniProt:M0RUX7 | MapMan:15.5.15 | : | : | : |
Description
Putative Protein suppressor of hairy wing [Source:GMGC_GENE;Acc:GSMUA_Achr11G23970_001]
Coordinates
chr11:-:23676797..23677222
Molecular Weight (calculated)
15642.9 Da
IEP (calculated)
10.550
GRAVY (calculated)
-0.545
Length
141 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRSRDAEDA ELLQLSLSFG VKPPAKIHRR TKTADGEFEC KTCSRRFPTF QALGGHRTSH KRPRIDRSTP KPSMHRCSIC GAGFALGQAL GGHMRRHKAM
101: DGELMRSDGE ELDLAMAPLQ VNLFDVAGRS SSHSPLLQLF V
101: DGELMRSDGE ELDLAMAPLQ VNLFDVAGRS SSHSPLLQLF V
001: MKRDRSDYEE SMKHIDIVES LMMLSRSFVV KQIDVKQSTG SKTNHNNHFE CKTCNRKFDS FQALGGHRAS HKKPKLIVDQ EQVKHRNKEN DMHKCTICDQ
101: MFGTGQALGG HMRKHRTSMI TEQSIVPSVV YSRPVFNRCS SSKEILDLNL TPLENDLVLI FGKNLVPQID LKFVN
101: MFGTGQALGG HMRKHRTSMI TEQSIVPSVV YSRPVFNRCS SSKEILDLNL TPLENDLVLI FGKNLVPQID LKFVN
Arabidopsis Description
At3g53600 [Source:UniProtKB/TrEMBL;Acc:Q9LFG0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.