Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | nucleus | 53.29 | 53.64 |
| GSMUA_Achr9P03210_001 | Banana | nucleus | 49.34 | 53.57 |
| GSMUA_Achr5P28550_001 | Banana | nucleus | 59.21 | 52.63 |
| GSMUA_Achr10P... | Banana | nucleus | 58.55 | 50.0 |
| GSMUA_Achr5P29140_001 | Banana | nucleus | 56.58 | 49.43 |
| GSMUA_Achr8P02630_001 | Banana | nucleus | 31.58 | 48.0 |
| VIT_06s0004g04180.t01 | Wine grape | nucleus | 49.34 | 47.17 |
| Solyc05g054650.1.1 | Tomato | plastid | 44.74 | 44.74 |
| PGSC0003DMT400060523 | Potato | mitochondrion | 40.13 | 44.2 |
| KRH01600 | Soybean | cytosol, extracellular, nucleus | 50.66 | 44.0 |
| KRH70509 | Soybean | nucleus | 51.32 | 43.33 |
| VIT_13s0019g00480.t01 | Wine grape | nucleus | 50.0 | 43.18 |
| GSMUA_Achr6P34280_001 | Banana | cytosol, mitochondrion, nucleus | 29.61 | 40.91 |
| KRG90559 | Soybean | nucleus | 45.39 | 39.88 |
| Solyc05g054660.1.1 | Tomato | nucleus, plastid | 42.76 | 38.92 |
| GSMUA_Achr6P33180_001 | Banana | nucleus | 33.55 | 38.06 |
| KRH36195 | Soybean | extracellular | 46.05 | 37.84 |
| GSMUA_Achr1P06720_001 | Banana | nucleus | 36.18 | 36.42 |
| GSMUA_Achr10P... | Banana | nucleus | 38.82 | 36.2 |
| GSMUA_Achr11P... | Banana | nucleus | 31.58 | 34.04 |
| GSMUA_Achr1P01260_001 | Banana | mitochondrion, nucleus, peroxisome, plastid | 32.24 | 31.82 |
| PGSC0003DMT400060463 | Potato | nucleus | 41.45 | 30.29 |
| GSMUA_Achr11P... | Banana | nucleus | 37.5 | 29.53 |
| GSMUA_Achr11P... | Banana | nucleus | 37.5 | 28.79 |
| GSMUA_Achr1P03310_001 | Banana | nucleus | 28.29 | 25.75 |
| GSMUA_AchrUn_... | Banana | nucleus | 38.16 | 25.33 |
| GSMUA_Achr8P12900_001 | Banana | nucleus | 31.58 | 23.76 |
| GSMUA_Achr10P... | Banana | nucleus | 27.63 | 22.34 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr10P13540_001 | EnsemblPlants:GSMUA_Achr10T13540_001 | EnsemblPlantsGene:GSMUA_Achr10G13540_001 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF162 |
| PFAM:PF13912 | PFscan:PS50157 | ScanProsite:PS00028 | SEG:seg | SMART:SM00355 | SUPFAM:SSF57667 |
| UniParc:UPI000295B024 | UniProt:M0RHY0 | MapMan:15.5.15 | : | : | : |
Description
ZOS3-09 - C2H2 zinc finger protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr10G13540_001]
Coordinates
chr10:+:22127768..22128361
Molecular Weight (calculated)
16220.4 Da
IEP (calculated)
8.860
GRAVY (calculated)
-0.335
Length
152 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRTRVAGEG EVGSVHTMAH ALMQLSHGSA DDADVSSVSP PARVFECKTC NRQFPSFQAL GGHRASHKKL KLAGDGRGDG EGAKPRVHEC SICGLEFAIG
101: QALGGHMRRH RATTAACGQG LPETKSTEGK RVLKIFGFEL VYTNPVAVDC LY
101: QALGGHMRRH RATTAACGQG LPETKSTEGK RVLKIFGFEL VYTNPVAVDC LY
001: MERGRSDMEM INNMANCLIL LSKAHQNDTK SRVFACKTCN KEFPSFQALG GHRASHRRSA ALEGHAPPSP KRVKPVKHEC PICGAEFAVG QALGGHMRKH
101: RGGSGGGGGR SLAPATAPVT MKKSGGGNGK RVLCLDLNLT PLENEDLKLE LGRFIF
101: RGGSGGGGGR SLAPATAPVT MKKSGGGNGK RVLCLDLNLT PLENEDLKLE LGRFIF
Arabidopsis Description
At2g28710 [Source:UniProtKB/TrEMBL;Acc:Q9SI97]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.