Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400060523 | Potato | mitochondrion | 80.92 | 89.13 |
| Solyc05g054660.1.1 | Tomato | nucleus, plastid | 89.47 | 81.44 |
| VIT_06s0004g04180.t01 | Wine grape | nucleus | 61.18 | 58.49 |
| GSMUA_Achr9P03210_001 | Banana | nucleus | 49.34 | 53.57 |
| VIT_13s0019g00480.t01 | Wine grape | nucleus | 61.84 | 53.41 |
| KRG90559 | Soybean | nucleus | 59.87 | 52.6 |
| KRH36195 | Soybean | extracellular | 59.87 | 49.19 |
| Solyc06g075780.1.1 | Tomato | nucleus | 48.03 | 47.4 |
| GSMUA_Achr10P... | Banana | nucleus | 52.63 | 44.94 |
| GSMUA_Achr5P29140_001 | Banana | nucleus | 51.32 | 44.83 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion, nucleus | 44.74 | 44.74 |
| GSMUA_Achr5P28550_001 | Banana | nucleus | 49.34 | 43.86 |
| GSMUA_Achr11P... | Banana | nucleus | 43.42 | 43.71 |
| Solyc11g073060.1.1 | Tomato | nucleus | 42.76 | 42.21 |
| TraesCS4D01G204300.1 | Wheat | nucleus | 49.34 | 41.44 |
| TraesCS4A01G101000.1 | Wheat | nucleus | 48.68 | 40.66 |
| TraesCS4B01G203400.1 | Wheat | nucleus | 48.68 | 40.44 |
| GSMUA_Achr6P33180_001 | Banana | nucleus | 35.53 | 40.3 |
| HORVU4Hr1G058720.1 | Barley | nucleus | 49.34 | 40.11 |
| HORVU4Hr1G058690.1 | Barley | nucleus | 48.68 | 39.36 |
| Zm00001d028667_P001 | Maize | nucleus | 46.71 | 39.01 |
| TraesCS1A01G040300.1 | Wheat | nucleus | 48.03 | 38.62 |
| TraesCS1B01G053100.1 | Wheat | nucleus | 48.03 | 38.62 |
| TraesCS1B01G053200.1 | Wheat | nucleus | 48.03 | 38.62 |
| TraesCS1A01G040100.1 | Wheat | nucleus | 43.42 | 38.6 |
| TraesCS1D01G041500.1 | Wheat | nucleus | 46.71 | 37.77 |
| TraesCS4A01G101100.1 | Wheat | nucleus | 47.37 | 37.7 |
| EER90627 | Sorghum | cytosol, mitochondrion, nucleus | 36.18 | 37.67 |
| GSMUA_Achr11P... | Banana | nucleus | 34.87 | 37.59 |
| TraesCS5D01G489800.1 | Wheat | nucleus | 38.82 | 37.58 |
| TraesCS1D01G041600.1 | Wheat | nucleus | 46.71 | 37.17 |
| TraesCS5B01G489400.1 | Wheat | nucleus | 38.82 | 36.88 |
| Zm00001d034639_P001 | Maize | nucleus | 36.18 | 36.67 |
| KXG21109 | Sorghum | nucleus | 48.68 | 36.63 |
| HORVU1Hr1G006910.1 | Barley | nucleus | 46.05 | 36.46 |
| Os05t0114400-01 | Rice | nucleus | 47.37 | 36.36 |
| Zm00001d035609_P001 | Maize | nucleus | 47.37 | 36.36 |
| TraesCS1D01G041700.1 | Wheat | nucleus | 45.39 | 36.32 |
| HORVU1Hr1G006920.1 | Barley | nucleus | 43.42 | 36.26 |
| Os03t0279700-01 | Rice | nucleus | 45.39 | 36.13 |
| TraesCS5A01G476500.1 | Wheat | nucleus | 37.5 | 36.08 |
| TraesCS1B01G053000.1 | Wheat | nucleus | 44.74 | 35.79 |
| TraesCS3A01G356100.1 | Wheat | nucleus | 48.03 | 35.78 |
| Zm00001d012967_P001 | Maize | plastid | 29.61 | 35.71 |
| EER92453 | Sorghum | nucleus | 46.05 | 35.53 |
| HORVU3Hr1G086790.2 | Barley | nucleus | 46.05 | 35.35 |
| HORVU5Hr1G112820.1 | Barley | nucleus | 36.84 | 35.22 |
| Zm00001d047786_P001 | Maize | nucleus | 46.05 | 35.18 |
| Os01t0838600-00 | Rice | nucleus | 50.0 | 35.02 |
| TraesCS3D01G350100.1 | Wheat | nucleus | 46.05 | 34.65 |
| TraesCS3B01G389000.1 | Wheat | nucleus | 47.37 | 34.62 |
| TraesCS5D01G491300.1 | Wheat | nucleus | 30.26 | 34.59 |
| HORVU3Hr1G086840.1 | Barley | nucleus | 46.05 | 34.31 |
| TraesCS5A01G477500.1 | Wheat | nucleus | 30.92 | 34.31 |
| TraesCS5D01G491100.1 | Wheat | nucleus | 30.26 | 34.07 |
| TraesCS1A01G040200.1 | Wheat | nucleus | 44.74 | 34.0 |
| TraesCS5B01G490400.1 | Wheat | nucleus | 29.61 | 33.83 |
| TraesCS5D01G490700.1 | Wheat | nucleus | 29.61 | 33.83 |
| TraesCS5A01G477600.1 | Wheat | nucleus | 30.26 | 33.82 |
| TraesCS5A01G478000.1 | Wheat | nucleus | 29.61 | 33.58 |
| HORVU5Hr1G112940.1 | Barley | nucleus | 30.26 | 33.58 |
| TraesCS5B01G490900.1 | Wheat | nucleus | 30.26 | 33.58 |
| Os03t0820400-01 | Rice | nucleus | 31.58 | 33.33 |
| TraesCS5A01G478200.1 | Wheat | nucleus | 29.61 | 33.33 |
| Zm00001d012430_P001 | Maize | nucleus | 46.05 | 33.18 |
| TraesCS5B01G490700.1 | Wheat | nucleus | 29.61 | 33.09 |
| TraesCS5B01G491100.1 | Wheat | nucleus | 29.61 | 33.09 |
| Zm00001d038379_P001 | Maize | nucleus | 40.13 | 32.8 |
| TraesCS5A01G477100.1 | Wheat | nucleus | 28.95 | 32.59 |
| TraesCS5A01G477200.1 | Wheat | mitochondrion, nucleus | 28.95 | 32.59 |
| TraesCS5D01G490800.1 | Wheat | nucleus | 28.29 | 32.33 |
| TraesCS5A01G477800.1 | Wheat | nucleus | 28.95 | 32.12 |
| TraesCS5D01G491700.1 | Wheat | nucleus | 28.95 | 32.12 |
| TraesCS5B01G490500.1 | Wheat | nucleus | 28.29 | 32.09 |
| TraesCS5B01G491300.1 | Wheat | nucleus | 28.29 | 31.62 |
| TraesCS5D01G490900.1 | Wheat | nucleus | 28.29 | 31.62 |
| Os01t0839100-01 | Rice | nucleus | 35.53 | 31.58 |
| Os05t0461200-00 | Rice | cytosol | 42.11 | 31.07 |
| TraesCS3D01G350200.1 | Wheat | nucleus | 42.11 | 31.07 |
| Solyc03g093870.1.1 | Tomato | nucleus | 35.53 | 31.03 |
| Zm00001d034642_P001 | Maize | nucleus, plastid | 29.61 | 31.03 |
| Zm00001d012427_P001 | Maize | nucleus | 34.21 | 30.77 |
| HORVU5Hr1G045780.1 | Barley | nucleus | 28.29 | 30.71 |
| HORVU5Hr1G113070.1 | Barley | nucleus | 28.29 | 30.71 |
| HORVU5Hr1G113130.1 | Barley | nucleus | 28.29 | 30.71 |
| Zm00001d042934_P001 | Maize | nucleus | 45.39 | 30.67 |
| TraesCS1A01G286100.1 | Wheat | nucleus | 36.18 | 30.56 |
| EES03852 | Sorghum | cytosol | 46.05 | 30.3 |
| TraesCS5D01G026400.1 | Wheat | nucleus | 26.97 | 30.15 |
| EES18355 | Sorghum | nucleus | 41.45 | 30.14 |
| TraesCS5B01G491000.1 | Wheat | nucleus | 31.58 | 29.81 |
| EER93193 | Sorghum | cytosol, nucleus, plastid | 28.95 | 29.53 |
| TraesCS5D01G490500.1 | Wheat | nucleus | 32.24 | 28.82 |
| TraesCS5A01G477900.1 | Wheat | nucleus | 31.58 | 28.4 |
| HORVU1Hr1G021410.1 | Barley | plastid | 28.95 | 28.39 |
| TraesCS5A01G477300.1 | Wheat | nucleus | 21.05 | 28.32 |
| TraesCS5D01G490300.1 | Wheat | nucleus | 30.92 | 28.31 |
| TraesCS5D01G491200.1 | Wheat | nucleus | 30.26 | 28.22 |
| TraesCS5A01G478300.1 | Wheat | nucleus | 30.26 | 27.88 |
| TraesCS5A01G478100.1 | Wheat | nucleus | 30.92 | 27.81 |
| TraesCS5B01G490300.1 | Wheat | nucleus | 29.61 | 27.78 |
| TraesCSU01G075000.1 | Wheat | nucleus | 30.26 | 27.71 |
| GSMUA_Achr10P... | Banana | nucleus | 34.21 | 27.66 |
| Os03t0820300-01 | Rice | nucleus | 30.92 | 27.65 |
| TraesCS5D01G490200.1 | Wheat | nucleus | 30.92 | 27.65 |
| TraesCS5D01G490600.1 | Wheat | nucleus | 30.92 | 27.65 |
| TraesCS5B01G490800.1 | Wheat | nucleus | 30.92 | 27.49 |
| TraesCS5B01G489800.1 | Wheat | nucleus | 31.58 | 27.43 |
| OQU87825 | Sorghum | nucleus | 33.55 | 27.42 |
| TraesCS5A01G478400.1 | Wheat | nucleus | 28.29 | 27.39 |
| TraesCS5D01G491400.1 | Wheat | nucleus | 30.26 | 27.38 |
| TraesCS5D01G491500.1 | Wheat | nucleus | 30.92 | 27.33 |
| TraesCS5A01G477400.1 | Wheat | nucleus | 31.58 | 27.27 |
| TraesCS5D01G026300.1 | Wheat | nucleus | 30.92 | 27.17 |
| TraesCS5D01G491600.1 | Wheat | nucleus | 30.92 | 27.17 |
| TraesCS5B01G490100.1 | Wheat | nucleus | 31.58 | 27.12 |
| Os11t0702300-00 | Rice | nucleus | 28.95 | 26.99 |
| TraesCS5D01G491000.1 | Wheat | nucleus | 31.58 | 26.97 |
| Zm00001d042933_P001 | Maize | nucleus | 32.24 | 26.92 |
| TraesCS3A01G356200.1 | Wheat | nucleus | 44.08 | 26.91 |
| TraesCS5A01G476900.1 | Wheat | nucleus | 30.92 | 26.86 |
| Zm00001d012968_P001 | Maize | nucleus | 30.92 | 26.86 |
| TraesCS3B01G389100.1 | Wheat | nucleus | 45.39 | 26.85 |
| EER93194 | Sorghum | nucleus, plastid | 32.24 | 26.78 |
| HORVU5Hr1G112900.1 | Barley | nucleus | 32.24 | 26.78 |
| TraesCS4A01G174100.1 | Wheat | nucleus | 27.63 | 26.75 |
| HORVU5Hr1G113090.1 | Barley | nucleus | 30.26 | 26.74 |
| TraesCS3A01G356600.1 | Wheat | nucleus | 33.55 | 26.7 |
| TraesCS3D01G350700.1 | Wheat | nucleus | 32.89 | 26.6 |
| Zm00001d034641_P001 | Maize | nucleus | 30.26 | 26.59 |
| TraesCS5D01G490400.1 | Wheat | nucleus | 30.92 | 26.55 |
| TraesCS4D01G141500.1 | Wheat | nucleus | 27.63 | 26.42 |
| TraesCS5A01G477000.1 | Wheat | nucleus | 30.92 | 26.4 |
| TraesCS5B01G491200.1 | Wheat | nucleus | 31.58 | 26.37 |
| TraesCS5B01G490000.1 | Wheat | nucleus | 30.26 | 25.99 |
| HORVU5Hr1G112870.1 | Barley | nucleus | 32.89 | 25.91 |
| Os11t0702400-01 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 28.29 | 25.29 |
| TraesCS3B01G389400.1 | Wheat | nucleus | 32.24 | 25.0 |
| HORVU5Hr1G112970.1 | Barley | nucleus | 30.26 | 24.21 |
| HORVU6Hr1G052990.1 | Barley | cytosol, mitochondrion, nucleus | 14.47 | 24.18 |
| Solyc11g066400.1.1 | Tomato | nucleus, plastid | 46.71 | 24.15 |
| TraesCS5B01G490600.1 | Wheat | nucleus | 31.58 | 23.88 |
| Zm00001d045211_P001 | Maize | nucleus | 27.63 | 23.6 |
| Os05t0460900-00 | Rice | cytosol | 26.97 | 23.56 |
| EES10296 | Sorghum | plastid | 28.29 | 23.5 |
| Solyc09g008440.1.1 | Tomato | nucleus | 44.74 | 21.94 |
| Solyc06g074800.1.1 | Tomato | nucleus | 46.05 | 21.47 |
| HORVU5Hr1G112930.1 | Barley | nucleus | 29.61 | 20.83 |
| HORVU5Hr1G045760.1 | Barley | nucleus | 30.26 | 20.0 |
| OQU84076 | Sorghum | nucleus | 28.29 | 18.78 |
| TraesCS1B01G295400.1 | Wheat | nucleus | 28.95 | 18.57 |
| TraesCS4B01G143400.1 | Wheat | nucleus | 19.74 | 18.52 |
| TraesCS1A01G285900.1 | Wheat | nucleus | 28.95 | 18.26 |
| Solyc05g055500.1.1 | Tomato | nucleus | 41.45 | 17.4 |
Protein Annotations
| MapMan:15.5.15 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0010200 |
| InterPro:IPR013087 | UniProt:K4C2E2 | PFAM:PF13912 | ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR26374 |
| PANTHER:PTHR26374:SF162 | SMART:SM00355 | SUPFAM:SSF57667 | EnsemblPlantsGene:Solyc05g054650.1 | EnsemblPlants:Solyc05g054650.1.1 | UniParc:UPI0002766CB2 |
| InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr5:+:64521075..64521533
Molecular Weight (calculated)
17389.0 Da
IEP (calculated)
9.492
GRAVY (calculated)
-0.652
Length
152 amino acids
Sequence
(BLAST)
(BLAST)
001: MANYLMLFSR QENHFNTMVN NSPSRVFECK TCNRQFSSFQ ALGGHRASHK KPRLMGEMNF HLPISPPKPK THECSICGLE FPIGQALGGH MRRHRGMLNE
101: NNNNNNQVPN HDVMKKSSNN PRVLCLDLNL TPLENDLEFK LKKANPIVDC FL
101: NNNNNNQVPN HDVMKKSSNN PRVLCLDLNL TPLENDLEFK LKKANPIVDC FL
001: MERGRSDMEM INNMANCLIL LSKAHQNDTK SRVFACKTCN KEFPSFQALG GHRASHRRSA ALEGHAPPSP KRVKPVKHEC PICGAEFAVG QALGGHMRKH
101: RGGSGGGGGR SLAPATAPVT MKKSGGGNGK RVLCLDLNLT PLENEDLKLE LGRFIF
101: RGGSGGGGGR SLAPATAPVT MKKSGGGNGK RVLCLDLNLT PLENEDLKLE LGRFIF
Arabidopsis Description
At2g28710 [Source:UniProtKB/TrEMBL;Acc:Q9SI97]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.