Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G491100.1 | Wheat | nucleus | 87.31 | 86.67 |
| TraesCS5A01G477600.1 | Wheat | nucleus | 85.82 | 84.56 |
| TraesCS5A01G477500.1 | Wheat | nucleus | 85.07 | 83.21 |
| TraesCS5B01G490700.1 | Wheat | nucleus | 84.33 | 83.09 |
| TraesCS5A01G478200.1 | Wheat | nucleus | 79.85 | 79.26 |
| TraesCS5A01G477800.1 | Wheat | nucleus | 79.85 | 78.1 |
| Zm00001d012967_P001 | Maize | plastid | 61.94 | 65.87 |
| TraesCS5A01G477200.1 | Wheat | mitochondrion, nucleus | 61.94 | 61.48 |
| TraesCS5A01G477100.1 | Wheat | nucleus | 61.94 | 61.48 |
| EER93193 | Sorghum | cytosol, nucleus, plastid | 66.42 | 59.73 |
| Zm00001d034642_P001 | Maize | nucleus, plastid | 62.69 | 57.93 |
| TraesCS5A01G477300.1 | Wheat | nucleus | 47.76 | 56.64 |
| HORVU5Hr1G112930.1 | Barley | nucleus | 87.31 | 54.17 |
| TraesCS5A01G478400.1 | Wheat | nucleus | 56.72 | 48.41 |
| TraesCS5A01G478300.1 | Wheat | nucleus | 52.99 | 43.03 |
| TraesCS5A01G477900.1 | Wheat | nucleus | 53.73 | 42.6 |
| TraesCS5A01G477400.1 | Wheat | nucleus | 55.22 | 42.05 |
| TraesCS5A01G478100.1 | Wheat | nucleus | 52.99 | 42.01 |
| TraesCS5A01G476900.1 | Wheat | nucleus | 50.75 | 38.86 |
| TraesCS5A01G477000.1 | Wheat | nucleus | 51.49 | 38.76 |
| PGSC0003DMT400060523 | Potato | mitochondrion | 32.84 | 31.88 |
| TraesCS4A01G174100.1 | Wheat | nucleus | 37.31 | 31.85 |
| TraesCS5A01G476500.1 | Wheat | nucleus | 35.07 | 29.75 |
| Solyc05g054650.1.1 | Tomato | plastid | 33.58 | 29.61 |
| VIT_06s0004g04180.t01 | Wine grape | nucleus | 35.07 | 29.56 |
| Solyc05g054660.1.1 | Tomato | nucleus, plastid | 33.58 | 26.95 |
| TraesCS3A01G356600.1 | Wheat | nucleus | 38.06 | 26.7 |
| TraesCS1A01G286100.1 | Wheat | nucleus | 35.07 | 26.11 |
| KRG90559 | Soybean | nucleus | 33.58 | 26.01 |
| TraesCS1A01G040100.1 | Wheat | nucleus | 32.84 | 25.73 |
| TraesCS1A01G285900.1 | Wheat | nucleus | 46.27 | 25.73 |
| VIT_13s0019g00480.t01 | Wine grape | nucleus | 33.58 | 25.57 |
| TraesCS4A01G101000.1 | Wheat | nucleus | 34.33 | 25.27 |
| KRH01600 | Soybean | cytosol, extracellular, nucleus | 32.84 | 25.14 |
| TraesCS3A01G356100.1 | Wheat | nucleus | 38.06 | 25.0 |
| TraesCS4A01G101100.1 | Wheat | nucleus | 35.07 | 24.61 |
| KRH70509 | Soybean | nucleus | 32.84 | 24.44 |
| TraesCS1A01G040300.1 | Wheat | nucleus | 34.33 | 24.34 |
| KRH36195 | Soybean | extracellular | 33.58 | 24.32 |
| TraesCS1A01G040200.1 | Wheat | nucleus | 32.84 | 22.0 |
| PGSC0003DMT400060463 | Potato | nucleus | 32.84 | 21.15 |
| TraesCS3A01G356200.1 | Wheat | nucleus | 35.82 | 19.28 |
| TraesCS2A01G002400.1 | Wheat | nucleus | 35.82 | 14.04 |
| TraesCS6A01G404600.1 | Wheat | nucleus | 35.07 | 12.81 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G478000.1 | EnsemblPlantsGene:TraesCS5A01G478000 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF169 | PFAM:PF13912 |
| PFscan:PS50157 | ScanProsite:PS00028 | SEG:seg | SMART:SM00355 | SUPFAM:SSF57667 | MapMan:15.5.15 |
Description
No Description!
Coordinates
chr5A:+:651744414..651744818
Molecular Weight (calculated)
14645.7 Da
IEP (calculated)
10.691
GRAVY (calculated)
-0.403
Length
134 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSSMKHCRY QAEVPLSLSL SLGAVTGRNK KTRRSADGEF VCKTCSRSFP SFQALGGHRT SHLRGRHGLA LGLAAGTDLP ATKKATEQKQ AHQCHVCGLE
101: FEMGQALGRH MRRHREQEAA TTAHAPPVLL QLFV
101: FEMGQALGRH MRRHREQEAA TTAHAPPVLL QLFV
001: MVARSEEVEI VEDTAAKCLM LLSRVGECGG GGEKRVFRCK TCLKEFSSFQ ALGGHRASHK KLINSSDPSL LGSLSNKKTK TATSHPCPIC GVEFPMGQAL
101: GGHMRRHRSE KASPGTLVTR SFLPETTTVT TLKKSSSGKR VACLDLDSME SLVNWKLELG RTIS
101: GGHMRRHRSE KASPGTLVTR SFLPETTTVT TLKKSSSGKR VACLDLDSME SLVNWKLELG RTIS
Arabidopsis Description
ZAT8Zinc finger protein ZAT8 [Source:UniProtKB/Swiss-Prot;Acc:Q9LX85]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.