Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G020300.1 | Wheat | nucleus | 92.11 | 86.3 |
| GSMUA_Achr1P06720_001 | Banana | nucleus | 25.15 | 56.95 |
| Os04t0162500-01 | Rice | vacuole | 47.08 | 55.71 |
| Zm00001d004439_P001 | Maize | nucleus | 54.39 | 51.81 |
| Zm00001d024866_P001 | Maize | nucleus | 53.22 | 49.73 |
| EES10410 | Sorghum | nucleus | 53.51 | 45.64 |
| CDY11027 | Canola | nucleus | 26.9 | 39.83 |
| KRH67769 | Soybean | nucleus | 24.27 | 38.43 |
| VIT_08s0007g04770.t01 | Wine grape | nucleus | 30.99 | 38.41 |
| CDY11255 | Canola | nucleus | 28.07 | 37.8 |
| CDX80870 | Canola | nucleus | 28.07 | 37.8 |
| TraesCS5A01G477200.1 | Wheat | mitochondrion, nucleus | 14.62 | 37.04 |
| TraesCS5A01G478200.1 | Wheat | nucleus | 14.62 | 37.04 |
| Bra028831.1-P | Field mustard | nucleus | 28.95 | 36.94 |
| CDY10376 | Canola | nucleus | 28.36 | 36.6 |
| CDY44371 | Canola | nucleus | 28.66 | 36.57 |
| CDY04886 | Canola | nucleus | 28.66 | 36.57 |
| TraesCS5A01G477500.1 | Wheat | nucleus | 14.62 | 36.5 |
| TraesCS5A01G477100.1 | Wheat | nucleus | 14.33 | 36.3 |
| Bra005766.1-P | Field mustard | nucleus | 28.95 | 35.87 |
| TraesCS5A01G478000.1 | Wheat | nucleus | 14.04 | 35.82 |
| Bra009525.1-P | Field mustard | nucleus | 27.49 | 35.47 |
| CDX70302 | Canola | nucleus | 27.49 | 35.47 |
| TraesCS5A01G477600.1 | Wheat | nucleus | 14.04 | 35.29 |
| TraesCS4A01G101000.1 | Wheat | nucleus | 18.71 | 35.16 |
| TraesCS5A01G478400.1 | Wheat | nucleus | 16.08 | 35.03 |
| VIT_06s0061g00760.t01 | Wine grape | nucleus | 29.53 | 34.95 |
| TraesCS5A01G478300.1 | Wheat | nucleus | 16.67 | 34.55 |
| TraesCS5A01G476500.1 | Wheat | nucleus | 15.79 | 34.18 |
| KRH19960 | Soybean | nucleus | 28.66 | 34.03 |
| TraesCS5A01G477900.1 | Wheat | nucleus | 16.67 | 33.73 |
| TraesCS5A01G477800.1 | Wheat | nucleus | 13.45 | 33.58 |
| VIT_13s0019g05170.t01 | Wine grape | nucleus | 29.53 | 33.44 |
| PGSC0003DMT400001104 | Potato | nucleus | 28.36 | 33.33 |
| Solyc09g008440.1.1 | Tomato | nucleus | 30.12 | 33.23 |
| PGSC0003DMT400009871 | Potato | nucleus | 28.95 | 33.22 |
| TraesCS5A01G478100.1 | Wheat | nucleus | 16.37 | 33.14 |
| Solyc06g074800.1.1 | Tomato | nucleus | 31.58 | 33.13 |
| Solyc11g066400.1.1 | Tomato | nucleus, plastid | 28.36 | 32.99 |
| TraesCS5A01G477400.1 | Wheat | nucleus | 16.96 | 32.95 |
| AT5G03510.1 | Thale cress | nucleus | 28.07 | 32.88 |
| PGSC0003DMT400018457 | Potato | nucleus | 31.58 | 32.83 |
| TraesCS1A01G286100.1 | Wheat | nucleus | 17.25 | 32.78 |
| TraesCS1A01G040100.1 | Wheat | nucleus | 16.37 | 32.75 |
| KRH26537 | Soybean | nucleus, plastid | 29.82 | 32.59 |
| TraesCS5A01G477000.1 | Wheat | nucleus | 16.96 | 32.58 |
| TraesCS5A01G476900.1 | Wheat | nucleus | 16.67 | 32.57 |
| KRH32562 | Soybean | nucleus | 28.36 | 32.55 |
| TraesCS1A01G040300.1 | Wheat | nucleus | 17.84 | 32.28 |
| KRH22825 | Soybean | nucleus | 29.53 | 32.06 |
| TraesCS4A01G101100.1 | Wheat | nucleus | 17.84 | 31.94 |
| KRH30555 | Soybean | nucleus | 28.66 | 31.82 |
| KRH25111 | Soybean | nucleus, plastid | 29.24 | 31.75 |
| CDY71034 | Canola | nucleus | 22.51 | 31.43 |
| TraesCS3A01G356100.1 | Wheat | nucleus | 18.71 | 31.37 |
| TraesCS4A01G174100.1 | Wheat | nucleus | 14.33 | 31.21 |
| CDY41350 | Canola | nucleus, plastid | 22.81 | 30.95 |
| TraesCS3A01G356600.1 | Wheat | nucleus | 17.25 | 30.89 |
| KRG92135 | Soybean | nucleus | 29.53 | 30.89 |
| TraesCS6A01G404600.1 | Wheat | nucleus | 33.04 | 30.79 |
| TraesCS1A01G040200.1 | Wheat | nucleus | 17.84 | 30.5 |
| TraesCS5A01G477300.1 | Wheat | nucleus | 9.94 | 30.09 |
| CDX70228 | Canola | nucleus | 27.78 | 29.32 |
| CDY44852 | Canola | nucleus | 27.49 | 28.92 |
| CDY08602 | Canola | nucleus | 28.36 | 28.7 |
| KRH34655 | Soybean | nucleus | 29.53 | 28.37 |
| CDY00945 | Canola | nucleus | 27.78 | 28.11 |
| Bra034116.1-P | Field mustard | plastid | 22.81 | 28.06 |
| CDY11288 | Canola | nucleus | 26.61 | 27.66 |
| Bra009457.1-P | Field mustard | nucleus | 27.78 | 27.54 |
| KRG96047 | Soybean | mitochondrion | 28.66 | 27.15 |
| Bra029843.1-P | Field mustard | nucleus | 25.73 | 27.08 |
| CDY58436 | Canola | nucleus | 26.9 | 27.06 |
| CDY61764 | Canola | nucleus | 26.61 | 26.76 |
| Solyc05g055500.1.1 | Tomato | nucleus | 27.78 | 26.24 |
| AT5G04390.1 | Thale cress | nucleus | 27.78 | 26.24 |
| Bra028791.1-P | Field mustard | nucleus | 26.9 | 26.14 |
| Bra005803.1-P | Field mustard | nucleus | 26.9 | 25.63 |
| AT3G10470.1 | Thale cress | nucleus | 29.24 | 25.13 |
| PGSC0003DMT400079773 | Potato | nucleus | 26.9 | 25.0 |
| TraesCS3A01G356200.1 | Wheat | nucleus | 17.54 | 24.1 |
| CDX89591 | Canola | nucleus | 14.62 | 24.04 |
| TraesCS1A01G285900.1 | Wheat | nucleus | 15.79 | 22.41 |
| CDY42128 | Canola | nucleus | 14.33 | 21.97 |
| CDY05027 | Canola | nucleus | 10.23 | 20.96 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G002400.1 | EnsemblPlantsGene:TraesCS2A01G002400 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | InterPro:IPR013087 |
| InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF329 | PFAM:PF13912 | PFscan:PS50157 |
| ScanProsite:PS00028 | SEG:seg | SMART:SM00355 | SUPFAM:SSF57667 | MapMan:15.5.15 | : |
Description
No Description!
Coordinates
chr2A:-:1364422..1365450
Molecular Weight (calculated)
35039.3 Da
IEP (calculated)
7.421
GRAVY (calculated)
-0.261
Length
342 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEDAGDGYG TPPAALAAIV VKGKRSKRRR VHAAAEAEVT AVTTASAAGE VASSSSSVAD GGGWRSGADE AASGCVTEEE EDMALCLMLL ARGGGGQGSR
101: AGPSSSSSSV VVRDDVAVAT AREGKFRSRR PADGGEGEFV YECRTCGKCF PSFQALGGHR TSHKKPRLPL PLPPTTATTA SSEEKMKLPP QAAEEKTPPP
201: SPAAAVDRTV LAIPVPATPP KQEATATGVS SKQQGQGRVH ECSICGAEFG SGQALGGHMR RHRPLLPASA SVSSTDDVAA VLVIRKEKSL LELDLNMPAP
301: CDDAATATSP GSFTFAVKER PSVPAALLPF RAPASALVDC HF
101: AGPSSSSSSV VVRDDVAVAT AREGKFRSRR PADGGEGEFV YECRTCGKCF PSFQALGGHR TSHKKPRLPL PLPPTTATTA SSEEKMKLPP QAAEEKTPPP
201: SPAAAVDRTV LAIPVPATPP KQEATATGVS SKQQGQGRVH ECSICGAEFG SGQALGGHMR RHRPLLPASA SVSSTDDVAA VLVIRKEKSL LELDLNMPAP
301: CDDAATATSP GSFTFAVKER PSVPAALLPF RAPASALVDC HF
001: MMMGQDEVGS DQTQIIKGKR TKRQRSSSTF VVTAATTVTS TSSSAGGSGG ERAVSDEYNS AVSSPVTTDC TQEEEDMAIC LIMLARGTVL PSPDLKNSRK
101: IHQKISSENS SFYVYECKTC NRTFSSFQAL GGHRASHKKP RTSTEEKTRL PLTQPKSSAS EEGQNSHFKV SGSALASQAS NIINKANKVH ECSICGSEFT
201: SGQALGGHMR RHRTAVTTIS PVAATAEVSR NSTEEEIEIN IGRSMEQQRK YLPLDLNLPA PEDDLRESKF QGIVFSATPA LIDCHY
101: IHQKISSENS SFYVYECKTC NRTFSSFQAL GGHRASHKKP RTSTEEKTRL PLTQPKSSAS EEGQNSHFKV SGSALASQAS NIINKANKVH ECSICGSEFT
201: SGQALGGHMR RHRTAVTTIS PVAATAEVSR NSTEEEIEIN IGRSMEQQRK YLPLDLNLPA PEDDLRESKF QGIVFSATPA LIDCHY
Arabidopsis Description
ZAT5Zinc finger protein ZAT5 [Source:UniProtKB/Swiss-Prot;Acc:Q681X4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.