Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G041600.1 | Wheat | nucleus | 92.06 | 91.1 |
| HORVU1Hr1G006910.1 | Barley | nucleus | 89.95 | 88.54 |
| TraesCS1B01G053100.1 | Wheat | nucleus | 87.83 | 87.83 |
| TraesCS1A01G040100.1 | Wheat | nucleus | 65.08 | 71.93 |
| TraesCS1A01G040200.1 | Wheat | nucleus | 74.07 | 70.0 |
| Os05t0114400-01 | Rice | nucleus | 66.67 | 63.64 |
| KXG21109 | Sorghum | nucleus | 64.55 | 60.4 |
| Zm00001d035609_P001 | Maize | nucleus | 61.38 | 58.59 |
| PGSC0003DMT400060523 | Potato | mitochondrion | 38.1 | 52.17 |
| GSMUA_Achr9P03210_001 | Banana | nucleus | 35.98 | 48.57 |
| Solyc05g054650.1.1 | Tomato | plastid | 38.62 | 48.03 |
| VIT_06s0004g04180.t01 | Wine grape | nucleus | 39.68 | 47.17 |
| TraesCS4A01G101000.1 | Wheat | nucleus | 44.44 | 46.15 |
| VIT_13s0019g00480.t01 | Wine grape | nucleus | 41.8 | 44.89 |
| KRH01600 | Soybean | cytosol, extracellular, nucleus | 40.21 | 43.43 |
| TraesCS4A01G101100.1 | Wheat | nucleus | 43.39 | 42.93 |
| KRH70509 | Soybean | nucleus | 40.74 | 42.78 |
| Solyc05g054660.1.1 | Tomato | nucleus, plastid | 37.57 | 42.52 |
| KRG90559 | Soybean | nucleus | 38.62 | 42.2 |
| KRH36195 | Soybean | extracellular | 39.15 | 40.0 |
| TraesCS5A01G476500.1 | Wheat | nucleus | 31.75 | 37.97 |
| TraesCS3A01G356100.1 | Wheat | nucleus | 38.62 | 35.78 |
| TraesCS5A01G477500.1 | Wheat | nucleus | 25.93 | 35.77 |
| TraesCS5A01G477600.1 | Wheat | nucleus | 25.4 | 35.29 |
| TraesCS5A01G478200.1 | Wheat | nucleus | 24.87 | 34.81 |
| TraesCS5A01G477200.1 | Wheat | mitochondrion, nucleus | 24.87 | 34.81 |
| TraesCS5A01G478000.1 | Wheat | nucleus | 24.34 | 34.33 |
| TraesCS5A01G477100.1 | Wheat | nucleus | 23.81 | 33.33 |
| PGSC0003DMT400060463 | Potato | nucleus | 36.51 | 33.17 |
| TraesCS5A01G477800.1 | Wheat | nucleus | 22.75 | 31.39 |
| TraesCS1A01G286100.1 | Wheat | nucleus | 29.1 | 30.56 |
| TraesCS3A01G356600.1 | Wheat | nucleus | 30.16 | 29.84 |
| TraesCS5A01G478400.1 | Wheat | nucleus | 24.34 | 29.3 |
| TraesCS5A01G477900.1 | Wheat | nucleus | 25.93 | 28.99 |
| TraesCS5A01G478300.1 | Wheat | nucleus | 24.87 | 28.48 |
| TraesCS5A01G477300.1 | Wheat | nucleus | 16.93 | 28.32 |
| TraesCS5A01G478100.1 | Wheat | nucleus | 24.87 | 27.81 |
| TraesCS5A01G477400.1 | Wheat | nucleus | 25.4 | 27.27 |
| TraesCS5A01G477000.1 | Wheat | nucleus | 25.4 | 26.97 |
| TraesCS5A01G476900.1 | Wheat | nucleus | 24.87 | 26.86 |
| TraesCS4A01G174100.1 | Wheat | nucleus | 21.69 | 26.11 |
| TraesCS3A01G356200.1 | Wheat | nucleus | 34.39 | 26.1 |
| TraesCS1A01G285900.1 | Wheat | nucleus | 25.93 | 20.33 |
| TraesCS6A01G404600.1 | Wheat | nucleus | 35.98 | 18.53 |
| TraesCS2A01G002400.1 | Wheat | nucleus | 32.28 | 17.84 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G040300.1 | EnsemblPlantsGene:TraesCS1A01G040300 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF162 | PFAM:PF13912 |
| PFscan:PS50157 | ScanProsite:PS00028 | SEG:seg | SMART:SM00355 | SUPFAM:SSF57667 | MapMan:15.5.15 |
Description
No Description!
Coordinates
chr1A:-:22282410..22282979
Molecular Weight (calculated)
20463.7 Da
IEP (calculated)
7.236
GRAVY (calculated)
-0.371
Length
189 amino acids
Sequence
(BLAST)
(BLAST)
001: MTKRYAFEEK EMARMLLLVS REQAMPMPMP MAVRGDRAPE RVFVCKTCDR VFPSFQALGG HRASHKKPRL DDGGNLKPKL HGCSVCGLEF AIGQALGGHM
101: RRHRAMAVGG GGGVMAITPP TAAIKKHGDS SDDAVVGMKR GLWLDLNHPP CDEYGTSSES DDECGHDAAA GGYTFHQFLD TGTMEVDCV
101: RRHRAMAVGG GGGVMAITPP TAAIKKHGDS SDDAVVGMKR GLWLDLNHPP CDEYGTSSES DDECGHDAAA GGYTFHQFLD TGTMEVDCV
001: MMMGQDEVGS DQTQIIKGKR TKRQRSSSTF VVTAATTVTS TSSSAGGSGG ERAVSDEYNS AVSSPVTTDC TQEEEDMAIC LIMLARGTVL PSPDLKNSRK
101: IHQKISSENS SFYVYECKTC NRTFSSFQAL GGHRASHKKP RTSTEEKTRL PLTQPKSSAS EEGQNSHFKV SGSALASQAS NIINKANKVH ECSICGSEFT
201: SGQALGGHMR RHRTAVTTIS PVAATAEVSR NSTEEEIEIN IGRSMEQQRK YLPLDLNLPA PEDDLRESKF QGIVFSATPA LIDCHY
101: IHQKISSENS SFYVYECKTC NRTFSSFQAL GGHRASHKKP RTSTEEKTRL PLTQPKSSAS EEGQNSHFKV SGSALASQAS NIINKANKVH ECSICGSEFT
201: SGQALGGHMR RHRTAVTTIS PVAATAEVSR NSTEEEIEIN IGRSMEQQRK YLPLDLNLPA PEDDLRESKF QGIVFSATPA LIDCHY
Arabidopsis Description
ZAT5Zinc finger protein ZAT5 [Source:UniProtKB/Swiss-Prot;Acc:Q681X4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.