Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G490300.1 | Wheat | nucleus | 82.58 | 90.74 |
| TraesCS5D01G490600.1 | Wheat | nucleus | 86.52 | 90.59 |
| TraesCS5B01G490000.1 | Wheat | nucleus | 88.2 | 88.7 |
| TraesCS5A01G476900.1 | Wheat | nucleus | 79.78 | 81.14 |
| TraesCS5A01G478300.1 | Wheat | nucleus | 72.47 | 78.18 |
| TraesCS5A01G478100.1 | Wheat | nucleus | 70.79 | 74.56 |
| TraesCS5A01G477400.1 | Wheat | nucleus | 73.03 | 73.86 |
| HORVU5Hr1G112870.1 | Barley | nucleus | 79.78 | 73.58 |
| TraesCS5A01G477900.1 | Wheat | nucleus | 67.42 | 71.01 |
| TraesCS5A01G478400.1 | Wheat | nucleus | 57.87 | 65.61 |
| Zm00001d034641_P001 | Maize | nucleus | 57.87 | 59.54 |
| EER93194 | Sorghum | nucleus, plastid | 60.11 | 58.47 |
| Os03t0820300-01 | Rice | nucleus | 55.06 | 57.65 |
| Zm00001d012968_P001 | Maize | nucleus | 54.49 | 55.43 |
| TraesCS5A01G478200.1 | Wheat | nucleus | 41.01 | 54.07 |
| TraesCS5A01G477500.1 | Wheat | nucleus | 41.57 | 54.01 |
| TraesCS5A01G477200.1 | Wheat | mitochondrion, nucleus | 39.89 | 52.59 |
| TraesCS5A01G477600.1 | Wheat | nucleus | 39.89 | 52.21 |
| TraesCS5A01G477100.1 | Wheat | nucleus | 39.33 | 51.85 |
| TraesCS5A01G477800.1 | Wheat | nucleus | 39.89 | 51.82 |
| TraesCS5A01G478000.1 | Wheat | nucleus | 38.76 | 51.49 |
| TraesCS5A01G477300.1 | Wheat | nucleus | 29.78 | 46.9 |
| PGSC0003DMT400060523 | Potato | mitochondrion | 26.4 | 34.06 |
| TraesCS4A01G174100.1 | Wheat | nucleus | 29.21 | 33.12 |
| VIT_06s0004g04180.t01 | Wine grape | nucleus | 29.21 | 32.7 |
| KRG90559 | Soybean | nucleus | 30.34 | 31.21 |
| TraesCS5A01G476500.1 | Wheat | nucleus | 27.53 | 31.01 |
| Solyc05g054650.1.1 | Tomato | plastid | 26.4 | 30.92 |
| KRH01600 | Soybean | cytosol, extracellular, nucleus | 29.21 | 29.71 |
| VIT_13s0019g00480.t01 | Wine grape | nucleus | 29.21 | 29.55 |
| KRH70509 | Soybean | nucleus | 29.21 | 28.89 |
| TraesCS3A01G356600.1 | Wheat | nucleus | 30.9 | 28.8 |
| Solyc05g054660.1.1 | Tomato | nucleus, plastid | 26.4 | 28.14 |
| KRH36195 | Soybean | extracellular | 29.21 | 28.11 |
| TraesCS1A01G040100.1 | Wheat | nucleus | 26.97 | 28.07 |
| TraesCS1A01G286100.1 | Wheat | nucleus | 28.09 | 27.78 |
| TraesCS4A01G101000.1 | Wheat | nucleus | 28.09 | 27.47 |
| TraesCS4A01G101100.1 | Wheat | nucleus | 28.65 | 26.7 |
| TraesCS1A01G040200.1 | Wheat | nucleus | 29.21 | 26.0 |
| TraesCS1A01G040300.1 | Wheat | nucleus | 26.97 | 25.4 |
| TraesCS1A01G285900.1 | Wheat | nucleus | 33.71 | 24.9 |
| TraesCS3A01G356100.1 | Wheat | nucleus | 28.09 | 24.51 |
| PGSC0003DMT400060463 | Potato | nucleus | 24.72 | 21.15 |
| TraesCS3A01G356200.1 | Wheat | nucleus | 27.53 | 19.68 |
| TraesCS2A01G002400.1 | Wheat | nucleus | 32.58 | 16.96 |
| TraesCS6A01G404600.1 | Wheat | nucleus | 30.9 | 14.99 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G477000.1 | EnsemblPlantsGene:TraesCS5A01G477000 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF166 | PFAM:PF13912 |
| PFscan:PS50157 | ScanProsite:PS00028 | SEG:seg | SMART:SM00355 | SUPFAM:SSF57667 | MapMan:15.5.15 |
Description
No Description!
Coordinates
chr5A:-:651540165..651540701
Molecular Weight (calculated)
19179.9 Da
IEP (calculated)
10.935
GRAVY (calculated)
-0.497
Length
178 amino acids
Sequence
(BLAST)
(BLAST)
001: MGAGMKRARN EEVLSLALAL STDSSTSSTT SADSAGSPAK KARRRTRGAV LATSGEGEFV CKTCGRAFAS FQALGGHRTS HLRGRHELDL GVGIARAISE
101: RRRRENKQHE CSICGMGFEM GQALGGHMRR HREEMALRGR GDDDDQLVWR GVALQPGQVV TGHQATANQP PVLLKLFV
101: RRRRENKQHE CSICGMGFEM GQALGGHMRR HREEMALRGR GDDDDQLVWR GVALQPGQVV TGHQATANQP PVLLKLFV
001: MVARSEEVEI VEDTAAKCLM LLSRVGECGG GGEKRVFRCK TCLKEFSSFQ ALGGHRASHK KLINSSDPSL LGSLSNKKTK TATSHPCPIC GVEFPMGQAL
101: GGHMRRHRSE KASPGTLVTR SFLPETTTVT TLKKSSSGKR VACLDLDSME SLVNWKLELG RTIS
101: GGHMRRHRSE KASPGTLVTR SFLPETTTVT TLKKSSSGKR VACLDLDSME SLVNWKLELG RTIS
Arabidopsis Description
ZAT8Zinc finger protein ZAT8 [Source:UniProtKB/Swiss-Prot;Acc:Q9LX85]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.