Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G350700.1 | Wheat | nucleus | 90.05 | 91.49 |
| TraesCS3B01G389400.1 | Wheat | nucleus | 93.72 | 91.33 |
| Os01t0839100-01 | Rice | nucleus | 63.35 | 70.76 |
| OQU87825 | Sorghum | nucleus | 67.54 | 69.35 |
| Zm00001d042933_P001 | Maize | nucleus | 60.73 | 63.74 |
| Zm00001d012427_P001 | Maize | nucleus | 54.45 | 61.54 |
| TraesCS5A01G477600.1 | Wheat | nucleus | 27.23 | 38.24 |
| TraesCS5A01G478000.1 | Wheat | nucleus | 26.7 | 38.06 |
| TraesCS5A01G477500.1 | Wheat | nucleus | 27.23 | 37.96 |
| TraesCS5A01G478200.1 | Wheat | nucleus | 26.18 | 37.04 |
| TraesCS5A01G477200.1 | Wheat | mitochondrion, nucleus | 26.18 | 37.04 |
| PGSC0003DMT400060523 | Potato | mitochondrion | 26.7 | 36.96 |
| TraesCS5A01G477800.1 | Wheat | nucleus | 25.13 | 35.04 |
| TraesCS5A01G476500.1 | Wheat | nucleus | 28.8 | 34.81 |
| VIT_13s0019g00480.t01 | Wine grape | nucleus | 31.41 | 34.09 |
| KRH01600 | Soybean | cytosol, extracellular, nucleus | 30.89 | 33.71 |
| Solyc05g054650.1.1 | Tomato | plastid | 26.7 | 33.55 |
| VIT_06s0004g04180.t01 | Wine grape | nucleus | 27.75 | 33.33 |
| TraesCS5A01G477100.1 | Wheat | nucleus | 23.04 | 32.59 |
| KRG90559 | Soybean | nucleus | 29.32 | 32.37 |
| KRH70509 | Soybean | nucleus | 30.37 | 32.22 |
| TraesCS5A01G477300.1 | Wheat | nucleus | 18.85 | 31.86 |
| TraesCS5A01G478400.1 | Wheat | nucleus | 26.18 | 31.85 |
| TraesCS4A01G101100.1 | Wheat | nucleus | 31.41 | 31.41 |
| TraesCS4A01G101000.1 | Wheat | nucleus | 29.84 | 31.32 |
| TraesCS5A01G477000.1 | Wheat | nucleus | 28.8 | 30.9 |
| Solyc05g054660.1.1 | Tomato | nucleus, plastid | 26.7 | 30.54 |
| TraesCS5A01G478300.1 | Wheat | nucleus | 26.18 | 30.3 |
| TraesCS5A01G476900.1 | Wheat | nucleus | 27.75 | 30.29 |
| KRH36195 | Soybean | extracellular | 29.32 | 30.27 |
| TraesCS5A01G477900.1 | Wheat | nucleus | 26.7 | 30.18 |
| TraesCS1A01G040300.1 | Wheat | nucleus | 29.84 | 30.16 |
| TraesCS1A01G286100.1 | Wheat | nucleus | 28.27 | 30.0 |
| TraesCS1A01G040100.1 | Wheat | nucleus | 26.7 | 29.82 |
| TraesCS5A01G478100.1 | Wheat | nucleus | 26.18 | 29.59 |
| TraesCS5A01G477400.1 | Wheat | nucleus | 27.23 | 29.55 |
| TraesCS3A01G356100.1 | Wheat | nucleus | 31.41 | 29.41 |
| TraesCS1A01G040200.1 | Wheat | nucleus | 27.75 | 26.5 |
| TraesCS4A01G174100.1 | Wheat | nucleus | 21.47 | 26.11 |
| TraesCS3A01G356200.1 | Wheat | nucleus | 31.41 | 24.1 |
| TraesCS1A01G285900.1 | Wheat | nucleus | 28.8 | 22.82 |
| PGSC0003DMT400060463 | Potato | nucleus | 24.61 | 22.6 |
| TraesCS2A01G002400.1 | Wheat | nucleus | 30.89 | 17.25 |
| TraesCS6A01G404600.1 | Wheat | nucleus | 30.37 | 15.8 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G356600.1 | EnsemblPlantsGene:TraesCS3A01G356600 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF206 | PFAM:PF13912 |
| PFscan:PS50157 | ScanProsite:PS00028 | SEG:seg | SMART:SM00355 | SUPFAM:SSF57667 | MapMan:15.5.15 |
Description
No Description!
Coordinates
chr3A:+:604325599..604326174
Molecular Weight (calculated)
20176.5 Da
IEP (calculated)
6.504
GRAVY (calculated)
-0.495
Length
191 amino acids
Sequence
(BLAST)
(BLAST)
001: MTLTREEAHE SKEMESLRVH ADALLSLSSP AASSTAPAGS KPATTAAGRR ALAAEGVFEC KTCSRRFTSF QALGGHRTSH TRLQARMLLH DQAADVPGAA
101: ERDRARVHEC AVCGLEFSMG QALGGHMRRH RGEAPPGPST SSSAAVHGDA SSGATQQQEV MPDLNYPPMD DCGGESSADR SSEHQLLDLL V
101: ERDRARVHEC AVCGLEFSMG QALGGHMRRH RGEAPPGPST SSSAAVHGDA SSGATQQQEV MPDLNYPPMD DCGGESSADR SSEHQLLDLL V
001: MVARSEEIVI VEEDTTAKCL MLLSRVGECG GGCGGDERVF RCKTCLKEFS SFQALGGHRA SHKKLINSDN PSLLGSLSNK KTKTSHPCPI CGVKFPMGQA
101: LGGHMRRHRN EKVSGSLVTR SFLPETTTVT ALKKFSSGKR VACLDLDLDS MESLVNWKLE LGRTISWS
101: LGGHMRRHRN EKVSGSLVTR SFLPETTTVT ALKKFSSGKR VACLDLDLDS MESLVNWKLE LGRTISWS
Arabidopsis Description
ZAT7ZAT7 [Source:UniProtKB/TrEMBL;Acc:A0A178VI57]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.