Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 2
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G490900.1 | Wheat | nucleus | 92.59 | 91.91 |
| TraesCS5A01G477300.1 | Wheat | nucleus | 76.3 | 91.15 |
| TraesCS5B01G490500.1 | Wheat | nucleus | 84.44 | 85.07 |
| TraesCS5A01G477100.1 | Wheat | nucleus | 80.0 | 80.0 |
| TraesCS5A01G478200.1 | Wheat | nucleus | 62.96 | 62.96 |
| TraesCS5A01G478000.1 | Wheat | nucleus | 61.48 | 61.94 |
| Os03t0820400-01 | Rice | nucleus | 65.19 | 61.11 |
| TraesCS5A01G477800.1 | Wheat | nucleus | 60.74 | 59.85 |
| TraesCS5A01G477500.1 | Wheat | nucleus | 60.74 | 59.85 |
| TraesCS5A01G477600.1 | Wheat | nucleus | 60.0 | 59.56 |
| TraesCS5A01G478300.1 | Wheat | nucleus | 57.78 | 47.27 |
| TraesCS5A01G478400.1 | Wheat | nucleus | 54.07 | 46.5 |
| TraesCS5A01G477900.1 | Wheat | nucleus | 57.78 | 46.15 |
| TraesCS5A01G478100.1 | Wheat | nucleus | 56.3 | 44.97 |
| TraesCS5A01G477400.1 | Wheat | nucleus | 56.3 | 43.18 |
| TraesCS5A01G476900.1 | Wheat | nucleus | 52.59 | 40.57 |
| TraesCS5A01G477000.1 | Wheat | nucleus | 52.59 | 39.89 |
| TraesCS4A01G174100.1 | Wheat | nucleus | 41.48 | 35.67 |
| PGSC0003DMT400060523 | Potato | mitochondrion | 31.11 | 30.43 |
| VIT_06s0004g04180.t01 | Wine grape | nucleus | 34.81 | 29.56 |
| TraesCS5A01G476500.1 | Wheat | nucleus | 34.07 | 29.11 |
| Solyc05g054650.1.1 | Tomato | plastid | 32.59 | 28.95 |
| Solyc05g054660.1.1 | Tomato | nucleus, plastid | 32.59 | 26.35 |
| TraesCS3A01G356600.1 | Wheat | nucleus | 37.04 | 26.18 |
| VIT_13s0019g00480.t01 | Wine grape | nucleus | 34.07 | 26.14 |
| TraesCS1A01G286100.1 | Wheat | nucleus | 34.81 | 26.11 |
| TraesCS1A01G040100.1 | Wheat | nucleus | 32.59 | 25.73 |
| KRG90559 | Soybean | nucleus | 32.59 | 25.43 |
| TraesCS4A01G101000.1 | Wheat | nucleus | 34.07 | 25.27 |
| KRH01600 | Soybean | cytosol, extracellular, nucleus | 32.59 | 25.14 |
| TraesCS4A01G101100.1 | Wheat | nucleus | 35.56 | 25.13 |
| TraesCS1A01G040300.1 | Wheat | nucleus | 34.81 | 24.87 |
| KRH70509 | Soybean | nucleus | 32.59 | 24.44 |
| KRH36195 | Soybean | extracellular | 32.59 | 23.78 |
| TraesCS3A01G356100.1 | Wheat | nucleus | 35.56 | 23.53 |
| TraesCS1A01G285900.1 | Wheat | nucleus | 40.74 | 22.82 |
| TraesCS1A01G040200.1 | Wheat | nucleus | 33.33 | 22.5 |
| PGSC0003DMT400060463 | Potato | nucleus | 31.85 | 20.67 |
| TraesCS3A01G356200.1 | Wheat | nucleus | 34.81 | 18.88 |
| TraesCS2A01G002400.1 | Wheat | nucleus | 37.04 | 14.62 |
| TraesCS6A01G404600.1 | Wheat | nucleus | 34.81 | 12.81 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G477200.1 | EnsemblPlantsGene:TraesCS5A01G477200 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF169 | PFAM:PF13912 |
| PFscan:PS50157 | ScanProsite:PS00028 | SEG:seg | SignalP:SignalP-noTM | SMART:SM00355 | SUPFAM:SSF57667 |
| MapMan:15.5.15 | : | : | : | : | : |
Description
No Description!
Coordinates
chr5A:-:651563952..651564359
Molecular Weight (calculated)
14464.4 Da
IEP (calculated)
10.732
GRAVY (calculated)
-0.364
Length
135 amino acids
Sequence
(BLAST)
(BLAST)
001: MTKHQRAAAH QAVSLSLSLS LGAVAGLNKK MRRAAAAAGG DQFVCKTCGR SFPSFQALGG HRTSHLRGRH GLALALTTGD HYYSVKPKST ADHKSQHRCH
101: ICGQGFETGQ ALGGHMRRHR DEAAEAPPVL LELFV
101: ICGQGFETGQ ALGGHMRRHR DEAAEAPPVL LELFV
001: MKRERSDFEE SLKNIDIAKC LMILAQTSMV KQIGLNQHTE SHTSNQFECK TCNKRFSSFQ ALGGHRASHK KPKLTVEQKD VKHLSNDYKG NHFHKCSICS
101: QSFGTGQALG GHMRRHRSSM TVEPSFISPM IPSMPVLKRC GSSKRILSLD LNLTPLENDL EYIFGKTFVP KIDMKFVL
101: QSFGTGQALG GHMRRHRSSM TVEPSFISPM IPSMPVLKRC GSSKRILSLD LNLTPLENDL EYIFGKTFVP KIDMKFVL
Arabidopsis Description
ZAT11ZAT11 [Source:UniProtKB/TrEMBL;Acc:A0A178VNJ8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.