Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G053000.1 | Wheat | nucleus | 88.0 | 92.63 |
| TraesCS1D01G041700.1 | Wheat | nucleus | 87.5 | 92.11 |
| HORVU1Hr1G006920.1 | Barley | nucleus | 79.5 | 87.36 |
| TraesCS1A01G040100.1 | Wheat | nucleus | 67.5 | 78.95 |
| TraesCS1A01G040300.1 | Wheat | nucleus | 70.0 | 74.07 |
| Os05t0114400-01 | Rice | nucleus | 67.0 | 67.68 |
| KXG21109 | Sorghum | nucleus | 65.5 | 64.85 |
| Zm00001d035609_P001 | Maize | nucleus | 60.0 | 60.61 |
| GSMUA_Achr9P03210_001 | Banana | nucleus | 35.5 | 50.71 |
| PGSC0003DMT400060523 | Potato | mitochondrion | 34.0 | 49.28 |
| TraesCS4A01G101000.1 | Wheat | nucleus | 43.0 | 47.25 |
| VIT_06s0004g04180.t01 | Wine grape | nucleus | 36.5 | 45.91 |
| Solyc05g054650.1.1 | Tomato | plastid | 34.0 | 44.74 |
| TraesCS4A01G101100.1 | Wheat | nucleus | 41.5 | 43.46 |
| KRH01600 | Soybean | cytosol, extracellular, nucleus | 38.0 | 43.43 |
| VIT_13s0019g00480.t01 | Wine grape | nucleus | 37.5 | 42.61 |
| KRH70509 | Soybean | nucleus | 38.0 | 42.22 |
| KRG90559 | Soybean | nucleus | 36.5 | 42.2 |
| Solyc05g054660.1.1 | Tomato | nucleus, plastid | 33.0 | 39.52 |
| KRH36195 | Soybean | extracellular | 36.5 | 39.46 |
| TraesCS5A01G476500.1 | Wheat | nucleus | 31.0 | 39.24 |
| TraesCS3A01G356100.1 | Wheat | nucleus | 35.5 | 34.8 |
| TraesCS5A01G478200.1 | Wheat | nucleus | 23.0 | 34.07 |
| TraesCS5A01G477500.1 | Wheat | nucleus | 23.0 | 33.58 |
| TraesCS5A01G477200.1 | Wheat | mitochondrion, nucleus | 22.5 | 33.33 |
| TraesCS5A01G477600.1 | Wheat | nucleus | 22.5 | 33.09 |
| TraesCS5A01G478000.1 | Wheat | nucleus | 22.0 | 32.84 |
| TraesCS5A01G477100.1 | Wheat | nucleus | 22.0 | 32.59 |
| PGSC0003DMT400060463 | Potato | nucleus | 32.5 | 31.25 |
| TraesCS1A01G286100.1 | Wheat | nucleus | 28.0 | 31.11 |
| TraesCS5A01G477800.1 | Wheat | nucleus | 21.0 | 30.66 |
| TraesCS5A01G477900.1 | Wheat | nucleus | 25.5 | 30.18 |
| TraesCS5A01G478300.1 | Wheat | nucleus | 24.5 | 29.7 |
| TraesCS5A01G478400.1 | Wheat | nucleus | 23.0 | 29.3 |
| TraesCS5A01G477000.1 | Wheat | nucleus | 26.0 | 29.21 |
| TraesCS5A01G478100.1 | Wheat | nucleus | 24.5 | 28.99 |
| TraesCS5A01G477400.1 | Wheat | nucleus | 25.5 | 28.98 |
| TraesCS5A01G476900.1 | Wheat | nucleus | 24.5 | 28.0 |
| TraesCS3A01G356600.1 | Wheat | nucleus | 26.5 | 27.75 |
| TraesCS5A01G477300.1 | Wheat | nucleus | 15.5 | 27.43 |
| TraesCS4A01G174100.1 | Wheat | nucleus | 20.5 | 26.11 |
| TraesCS3A01G356200.1 | Wheat | nucleus | 32.5 | 26.1 |
| TraesCS1A01G285900.1 | Wheat | nucleus | 24.5 | 20.33 |
| TraesCS6A01G404600.1 | Wheat | nucleus | 33.0 | 17.98 |
| TraesCS2A01G002400.1 | Wheat | nucleus | 30.5 | 17.84 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G040200.1 | EnsemblPlantsGene:TraesCS1A01G040200 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF162 | PFAM:PF13912 |
| PFscan:PS50157 | ScanProsite:PS00028 | SEG:seg | SMART:SM00355 | SUPFAM:SSF57667 | MapMan:15.5.15 |
Description
No Description!
Coordinates
chr1A:-:22271358..22271960
Molecular Weight (calculated)
21154.4 Da
IEP (calculated)
7.236
GRAVY (calculated)
-0.249
Length
200 amino acids
Sequence
(BLAST)
(BLAST)
001: MMKRFAFEER EMARVLLLVS REQAMPMPMP SSVGASVTGR GDRAPERAFM CKTCDRVFPS FQALGGHRAS HKKPRLDGDG DFKPKMHGCS ICGLEFAVGQ
101: ALGGHMRRHR AMVAGGHGVT AGPPAKTVNN LDDSSNAVVV VGSGGGIKPG LWLDLNQPPC DDVGGSDVDH GECGHDAAAA GYTFHQFLDA GTMPVDCVGY
101: ALGGHMRRHR AMVAGGHGVT AGPPAKTVNN LDDSSNAVVV VGSGGGIKPG LWLDLNQPPC DDVGGSDVDH GECGHDAAAA GYTFHQFLDA GTMPVDCVGY
001: MMMGQDEVGS DQTQIIKGKR TKRQRSSSTF VVTAATTVTS TSSSAGGSGG ERAVSDEYNS AVSSPVTTDC TQEEEDMAIC LIMLARGTVL PSPDLKNSRK
101: IHQKISSENS SFYVYECKTC NRTFSSFQAL GGHRASHKKP RTSTEEKTRL PLTQPKSSAS EEGQNSHFKV SGSALASQAS NIINKANKVH ECSICGSEFT
201: SGQALGGHMR RHRTAVTTIS PVAATAEVSR NSTEEEIEIN IGRSMEQQRK YLPLDLNLPA PEDDLRESKF QGIVFSATPA LIDCHY
101: IHQKISSENS SFYVYECKTC NRTFSSFQAL GGHRASHKKP RTSTEEKTRL PLTQPKSSAS EEGQNSHFKV SGSALASQAS NIINKANKVH ECSICGSEFT
201: SGQALGGHMR RHRTAVTTIS PVAATAEVSR NSTEEEIEIN IGRSMEQQRK YLPLDLNLPA PEDDLRESKF QGIVFSATPA LIDCHY
Arabidopsis Description
ZAT5Zinc finger protein ZAT5 [Source:UniProtKB/Swiss-Prot;Acc:Q681X4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.