Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS1B01G053000.1 | Wheat | nucleus | 88.95 | 88.95 |
TraesCS1A01G040200.1 | Wheat | nucleus | 92.11 | 87.5 |
HORVU1Hr1G006920.1 | Barley | nucleus | 81.05 | 84.62 |
TraesCS1A01G040100.1 | Wheat | nucleus | 71.58 | 79.53 |
TraesCS1D01G041500.1 | Wheat | nucleus | 71.58 | 72.34 |
TraesCS1D01G041600.1 | Wheat | nucleus | 71.05 | 70.68 |
Os05t0114400-01 | Rice | nucleus | 71.58 | 68.69 |
KXG21109 | Sorghum | nucleus | 68.42 | 64.36 |
Zm00001d035609_P001 | Maize | nucleus | 64.21 | 61.62 |
GSMUA_Achr9P03210_001 | Banana | nucleus | 37.89 | 51.43 |
PGSC0003DMT400060523 | Potato | mitochondrion | 35.79 | 49.28 |
TraesCS4D01G204300.1 | Wheat | nucleus | 45.26 | 47.51 |
VIT_06s0004g04180.t01 | Wine grape | nucleus | 38.42 | 45.91 |
Solyc05g054650.1.1 | Tomato | plastid | 36.32 | 45.39 |
KRH01600 | Soybean | cytosol, extracellular, nucleus | 40.53 | 44.0 |
VIT_13s0019g00480.t01 | Wine grape | nucleus | 40.0 | 43.18 |
KRH70509 | Soybean | nucleus | 40.53 | 42.78 |
KRG90559 | Soybean | nucleus | 38.95 | 42.77 |
Solyc05g054660.1.1 | Tomato | nucleus, plastid | 35.26 | 40.12 |
KRH36195 | Soybean | extracellular | 38.95 | 40.0 |
TraesCS5D01G489800.1 | Wheat | nucleus | 31.58 | 38.22 |
TraesCS5D01G491300.1 | Wheat | nucleus | 24.74 | 35.34 |
TraesCS3D01G350100.1 | Wheat | nucleus | 36.84 | 34.65 |
TraesCS5D01G490700.1 | Wheat | nucleus | 24.21 | 34.59 |
TraesCS5D01G491100.1 | Wheat | nucleus | 24.21 | 34.07 |
TraesCS5D01G490800.1 | Wheat | nucleus | 23.68 | 33.83 |
TraesCS5D01G490900.1 | Wheat | nucleus | 24.21 | 33.82 |
TraesCS5D01G491700.1 | Wheat | nucleus | 23.16 | 32.12 |
TraesCS5D01G026400.1 | Wheat | nucleus | 22.63 | 31.62 |
TraesCS3D01G350200.1 | Wheat | nucleus | 34.21 | 31.55 |
PGSC0003DMT400060463 | Potato | nucleus | 34.21 | 31.25 |
TraesCS5D01G490500.1 | Wheat | nucleus | 26.84 | 30.0 |
TraesCS5D01G490300.1 | Wheat | nucleus | 25.79 | 29.52 |
TraesCS5D01G026300.1 | Wheat | nucleus | 26.84 | 29.48 |
TraesCS5D01G491200.1 | Wheat | nucleus | 25.26 | 29.45 |
TraesCS5D01G490200.1 | Wheat | nucleus | 26.32 | 29.41 |
TraesCS5D01G491400.1 | Wheat | nucleus | 25.79 | 29.17 |
TraesCS5D01G491600.1 | Wheat | nucleus | 26.32 | 28.9 |
TraesCS5D01G490600.1 | Wheat | nucleus | 25.79 | 28.82 |
TraesCS3D01G350700.1 | Wheat | nucleus | 27.89 | 28.19 |
TraesCS5D01G491000.1 | Wheat | nucleus | 26.32 | 28.09 |
TraesCS5D01G491500.1 | Wheat | nucleus | 25.26 | 27.91 |
TraesCS5D01G490400.1 | Wheat | nucleus | 25.79 | 27.68 |
TraesCS4D01G141500.1 | Wheat | nucleus | 22.63 | 27.04 |
TraesCS6D01G387900.1 | Wheat | nucleus | 34.74 | 18.03 |
Protein Annotations
EnsemblPlants:TraesCS1D01G041700.1 | EnsemblPlantsGene:TraesCS1D01G041700 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF162 | PFAM:PF13912 |
PFscan:PS50157 | ScanProsite:PS00028 | SEG:seg | SMART:SM00355 | SUPFAM:SSF57667 | MapMan:15.5.15 |
Description
No Description!
Coordinates
chr1D:+:20193410..20193982
Molecular Weight (calculated)
20454.5 Da
IEP (calculated)
7.786
GRAVY (calculated)
-0.277
Length
190 amino acids
Sequence
(BLAST)
(BLAST)
001: MMKRFAFEER EMARVLLLVS REQAMPMPAR GDRAPERAFV CKTCDRVFPS FQALGGHRAS HKKPRLDGDG DFKPKMHGCS ICGLEFAVGQ ALGGHMRRHR
101: AMVAGGHGVT AVRPAITTNN PNDNSNAVVV VGSAGGIKRG LWLDLNQPPC DDLCGSDVDH GECGHDAATA GYTFHQFLDA GTMAVDCVGY
101: AMVAGGHGVT AVRPAITTNN PNDNSNAVVV VGSAGGIKRG LWLDLNQPPC DDLCGSDVDH GECGHDAATA GYTFHQFLDA GTMAVDCVGY
001: MMMGQDEVGS DQTQIIKGKR TKRQRSSSTF VVTAATTVTS TSSSAGGSGG ERAVSDEYNS AVSSPVTTDC TQEEEDMAIC LIMLARGTVL PSPDLKNSRK
101: IHQKISSENS SFYVYECKTC NRTFSSFQAL GGHRASHKKP RTSTEEKTRL PLTQPKSSAS EEGQNSHFKV SGSALASQAS NIINKANKVH ECSICGSEFT
201: SGQALGGHMR RHRTAVTTIS PVAATAEVSR NSTEEEIEIN IGRSMEQQRK YLPLDLNLPA PEDDLRESKF QGIVFSATPA LIDCHY
101: IHQKISSENS SFYVYECKTC NRTFSSFQAL GGHRASHKKP RTSTEEKTRL PLTQPKSSAS EEGQNSHFKV SGSALASQAS NIINKANKVH ECSICGSEFT
201: SGQALGGHMR RHRTAVTTIS PVAATAEVSR NSTEEEIEIN IGRSMEQQRK YLPLDLNLPA PEDDLRESKF QGIVFSATPA LIDCHY
Arabidopsis Description
ZAT5Zinc finger protein ZAT5 [Source:UniProtKB/Swiss-Prot;Acc:Q681X4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.