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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • mitochondrion 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1B01G053000.1 Wheat nucleus 88.95 88.95
TraesCS1A01G040200.1 Wheat nucleus 92.11 87.5
HORVU1Hr1G006920.1 Barley nucleus 81.05 84.62
TraesCS1A01G040100.1 Wheat nucleus 71.58 79.53
TraesCS1D01G041500.1 Wheat nucleus 71.58 72.34
TraesCS1D01G041600.1 Wheat nucleus 71.05 70.68
Os05t0114400-01 Rice nucleus 71.58 68.69
KXG21109 Sorghum nucleus 68.42 64.36
Zm00001d035609_P001 Maize nucleus 64.21 61.62
GSMUA_Achr9P03210_001 Banana nucleus 37.89 51.43
PGSC0003DMT400060523 Potato mitochondrion 35.79 49.28
TraesCS4D01G204300.1 Wheat nucleus 45.26 47.51
VIT_06s0004g04180.t01 Wine grape nucleus 38.42 45.91
Solyc05g054650.1.1 Tomato plastid 36.32 45.39
KRH01600 Soybean cytosol, extracellular, nucleus 40.53 44.0
VIT_13s0019g00480.t01 Wine grape nucleus 40.0 43.18
KRH70509 Soybean nucleus 40.53 42.78
KRG90559 Soybean nucleus 38.95 42.77
Solyc05g054660.1.1 Tomato nucleus, plastid 35.26 40.12
KRH36195 Soybean extracellular 38.95 40.0
TraesCS5D01G489800.1 Wheat nucleus 31.58 38.22
TraesCS5D01G491300.1 Wheat nucleus 24.74 35.34
TraesCS3D01G350100.1 Wheat nucleus 36.84 34.65
TraesCS5D01G490700.1 Wheat nucleus 24.21 34.59
TraesCS5D01G491100.1 Wheat nucleus 24.21 34.07
TraesCS5D01G490800.1 Wheat nucleus 23.68 33.83
TraesCS5D01G490900.1 Wheat nucleus 24.21 33.82
TraesCS5D01G491700.1 Wheat nucleus 23.16 32.12
TraesCS5D01G026400.1 Wheat nucleus 22.63 31.62
TraesCS3D01G350200.1 Wheat nucleus 34.21 31.55
PGSC0003DMT400060463 Potato nucleus 34.21 31.25
TraesCS5D01G490500.1 Wheat nucleus 26.84 30.0
TraesCS5D01G490300.1 Wheat nucleus 25.79 29.52
TraesCS5D01G026300.1 Wheat nucleus 26.84 29.48
TraesCS5D01G491200.1 Wheat nucleus 25.26 29.45
TraesCS5D01G490200.1 Wheat nucleus 26.32 29.41
TraesCS5D01G491400.1 Wheat nucleus 25.79 29.17
TraesCS5D01G491600.1 Wheat nucleus 26.32 28.9
TraesCS5D01G490600.1 Wheat nucleus 25.79 28.82
TraesCS3D01G350700.1 Wheat nucleus 27.89 28.19
TraesCS5D01G491000.1 Wheat nucleus 26.32 28.09
TraesCS5D01G491500.1 Wheat nucleus 25.26 27.91
TraesCS5D01G490400.1 Wheat nucleus 25.79 27.68
TraesCS4D01G141500.1 Wheat nucleus 22.63 27.04
TraesCS6D01G387900.1 Wheat nucleus 34.74 18.03
Protein Annotations
EnsemblPlants:TraesCS1D01G041700.1EnsemblPlantsGene:TraesCS1D01G041700Gene3D:3.30.160.60GO:GO:0003674GO:GO:0003676GO:GO:0005488
InterPro:IPR013087InterPro:Znf_C2H2_sfInterPro:Znf_C2H2_typePANTHER:PTHR26374PANTHER:PTHR26374:SF162PFAM:PF13912
PFscan:PS50157ScanProsite:PS00028SEG:segSMART:SM00355SUPFAM:SSF57667MapMan:15.5.15
Description
No Description!
Coordinates
chr1D:+:20193410..20193982
Molecular Weight (calculated)
20454.5 Da
IEP (calculated)
7.786
GRAVY (calculated)
-0.277
Length
190 amino acids
Sequence
(BLAST)
001: MMKRFAFEER EMARVLLLVS REQAMPMPAR GDRAPERAFV CKTCDRVFPS FQALGGHRAS HKKPRLDGDG DFKPKMHGCS ICGLEFAVGQ ALGGHMRRHR
101: AMVAGGHGVT AVRPAITTNN PNDNSNAVVV VGSAGGIKRG LWLDLNQPPC DDLCGSDVDH GECGHDAATA GYTFHQFLDA GTMAVDCVGY
Best Arabidopsis Sequence Match ( AT2G28200.1 )
(BLAST)
001: MMMGQDEVGS DQTQIIKGKR TKRQRSSSTF VVTAATTVTS TSSSAGGSGG ERAVSDEYNS AVSSPVTTDC TQEEEDMAIC LIMLARGTVL PSPDLKNSRK
101: IHQKISSENS SFYVYECKTC NRTFSSFQAL GGHRASHKKP RTSTEEKTRL PLTQPKSSAS EEGQNSHFKV SGSALASQAS NIINKANKVH ECSICGSEFT
201: SGQALGGHMR RHRTAVTTIS PVAATAEVSR NSTEEEIEIN IGRSMEQQRK YLPLDLNLPA PEDDLRESKF QGIVFSATPA LIDCHY
Arabidopsis Description
ZAT5Zinc finger protein ZAT5 [Source:UniProtKB/Swiss-Prot;Acc:Q681X4]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.