Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G041700.1 | Wheat | nucleus | 84.62 | 81.05 |
| TraesCS1B01G053000.1 | Wheat | nucleus | 84.62 | 81.05 |
| TraesCS1A01G040200.1 | Wheat | nucleus | 87.36 | 79.5 |
| TraesCS1A01G040100.1 | Wheat | nucleus | 70.33 | 74.85 |
| HORVU1Hr1G006910.1 | Barley | nucleus | 71.43 | 67.71 |
| Os05t0114400-01 | Rice | nucleus | 70.33 | 64.65 |
| KXG21109 | Sorghum | nucleus | 65.93 | 59.41 |
| Zm00001d035609_P001 | Maize | nucleus | 63.19 | 58.08 |
| GSMUA_Achr9P03210_001 | Banana | nucleus | 37.36 | 48.57 |
| PGSC0003DMT400060523 | Potato | mitochondrion | 35.71 | 47.1 |
| Solyc05g054650.1.1 | Tomato | plastid | 36.26 | 43.42 |
| HORVU4Hr1G058720.1 | Barley | nucleus | 43.96 | 42.78 |
| VIT_06s0004g04180.t01 | Wine grape | nucleus | 37.36 | 42.77 |
| KRH01600 | Soybean | cytosol, extracellular, nucleus | 40.66 | 42.29 |
| HORVU4Hr1G058690.1 | Barley | nucleus | 43.41 | 42.02 |
| KRH70509 | Soybean | nucleus | 40.66 | 41.11 |
| VIT_13s0019g00480.t01 | Wine grape | nucleus | 39.56 | 40.91 |
| KRG90559 | Soybean | nucleus | 38.46 | 40.46 |
| Solyc05g054660.1.1 | Tomato | nucleus, plastid | 35.16 | 38.32 |
| KRH36195 | Soybean | extracellular | 38.46 | 37.84 |
| HORVU5Hr1G112820.1 | Barley | nucleus | 32.42 | 37.11 |
| HORVU3Hr1G057300.1 | Barley | nucleus | 13.19 | 34.78 |
| HORVU5Hr1G095320.1 | Barley | nucleus | 13.19 | 34.78 |
| HORVU3Hr1G086840.1 | Barley | nucleus | 38.46 | 34.31 |
| HORVU3Hr1G086790.2 | Barley | nucleus | 36.81 | 33.84 |
| HORVU5Hr1G112940.1 | Barley | nucleus | 25.27 | 33.58 |
| HORVU4Hr1G082500.1 | Barley | nucleus | 12.64 | 33.33 |
| HORVU1Hr1G012760.1 | Barley | nucleus | 12.64 | 33.33 |
| HORVU5Hr1G113130.1 | Barley | nucleus | 25.27 | 32.86 |
| HORVU5Hr1G045780.1 | Barley | nucleus | 25.27 | 32.86 |
| HORVU5Hr1G113070.1 | Barley | nucleus | 24.73 | 32.14 |
| HORVU2Hr1G122100.1 | Barley | nucleus, plastid | 13.19 | 31.17 |
| PGSC0003DMT400060463 | Potato | nucleus | 34.62 | 30.29 |
| HORVU5Hr1G095390.1 | Barley | nucleus | 12.09 | 28.57 |
| HORVU5Hr1G095330.1 | Barley | nucleus | 12.09 | 28.57 |
| HORVU5Hr1G113090.1 | Barley | nucleus | 26.92 | 28.49 |
| HORVU1Hr1G021410.1 | Barley | plastid | 24.18 | 28.39 |
| HORVU1Hr1G020710.1 | Barley | nucleus | 11.54 | 27.27 |
| HORVU5Hr1G112900.1 | Barley | nucleus | 26.92 | 26.78 |
| HORVU5Hr1G112970.1 | Barley | nucleus | 26.92 | 25.79 |
| HORVU6Hr1G052990.1 | Barley | cytosol, mitochondrion, nucleus | 12.64 | 25.27 |
| HORVU5Hr1G112870.1 | Barley | nucleus | 26.37 | 24.87 |
| HORVU5Hr1G045760.1 | Barley | nucleus | 26.92 | 21.3 |
| HORVU5Hr1G112930.1 | Barley | nucleus | 25.27 | 21.3 |
| HORVU6Hr1G092750.1 | Barley | nucleus | 34.07 | 17.17 |
Protein Annotations
| EMBL:AK371765 | EMBL:DQ151540 | EnsemblPlants:HORVU1Hr1G006920.1 | EnsemblPlantsGene:HORVU1Hr1G006920 | Gene3D:3.30.160.60 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 |
| PANTHER:PTHR26374:SF162 | PFAM:PF13912 | PFscan:PS50157 | ProteinID:ABA25899.1 | ScanProsite:PS00028 | SEG:seg |
| SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI00006619DE | UniProt:Q2VGB8 | MapMan:15.5.15 | : |
Description
HvZFP16-1 [Source:UniProtKB/TrEMBL;Acc:Q2VGB8]
Coordinates
chrchr1H:+:13601616..13602984
Molecular Weight (calculated)
19307.1 Da
IEP (calculated)
8.313
GRAVY (calculated)
-0.209
Length
182 amino acids
Sequence
(BLAST)
(BLAST)
001: MNRFAFEERA RVLLLVSREQ AMPVPVAVRG DRAREQAFVC KTCHRVFPSF QALGGHRASH KKPRLDGDGG LKPKMHGCSV CGLEFAVGQA LGGHMRRHRA
101: MVAGGHGVTA AAARAETINN LDDSGNAAVV VGSGGGMKRG LWLDLNHPPC DDGDCGHDAA AAGYTFHQFL DAGTMPVDCV GY
101: MVAGGHGVTA AAARAETINN LDDSGNAAVV VGSGGGMKRG LWLDLNHPPC DDGDCGHDAA AAGYTFHQFL DAGTMPVDCV GY
001: MMMGQDEVGS DQTQIIKGKR TKRQRSSSTF VVTAATTVTS TSSSAGGSGG ERAVSDEYNS AVSSPVTTDC TQEEEDMAIC LIMLARGTVL PSPDLKNSRK
101: IHQKISSENS SFYVYECKTC NRTFSSFQAL GGHRASHKKP RTSTEEKTRL PLTQPKSSAS EEGQNSHFKV SGSALASQAS NIINKANKVH ECSICGSEFT
201: SGQALGGHMR RHRTAVTTIS PVAATAEVSR NSTEEEIEIN IGRSMEQQRK YLPLDLNLPA PEDDLRESKF QGIVFSATPA LIDCHY
101: IHQKISSENS SFYVYECKTC NRTFSSFQAL GGHRASHKKP RTSTEEKTRL PLTQPKSSAS EEGQNSHFKV SGSALASQAS NIINKANKVH ECSICGSEFT
201: SGQALGGHMR RHRTAVTTIS PVAATAEVSR NSTEEEIEIN IGRSMEQQRK YLPLDLNLPA PEDDLRESKF QGIVFSATPA LIDCHY
Arabidopsis Description
ZAT5Zinc finger protein ZAT5 [Source:UniProtKB/Swiss-Prot;Acc:Q681X4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.