Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G041700.1 | Wheat | nucleus | 88.95 | 88.95 |
| TraesCS1A01G040200.1 | Wheat | nucleus | 92.63 | 88.0 |
| HORVU1Hr1G006920.1 | Barley | nucleus | 81.05 | 84.62 |
| TraesCS1A01G040100.1 | Wheat | nucleus | 70.53 | 78.36 |
| TraesCS1B01G053200.1 | Wheat | nucleus | 74.21 | 74.6 |
| TraesCS1B01G053100.1 | Wheat | nucleus | 70.0 | 70.37 |
| Os05t0114400-01 | Rice | nucleus | 72.11 | 69.19 |
| KXG21109 | Sorghum | nucleus | 67.37 | 63.37 |
| Zm00001d035609_P001 | Maize | nucleus | 64.21 | 61.62 |
| GSMUA_Achr9P03210_001 | Banana | nucleus | 36.84 | 50.0 |
| PGSC0003DMT400060523 | Potato | mitochondrion | 35.26 | 48.55 |
| TraesCS4B01G203400.1 | Wheat | nucleus | 45.79 | 47.54 |
| VIT_06s0004g04180.t01 | Wine grape | nucleus | 37.89 | 45.28 |
| Solyc05g054650.1.1 | Tomato | plastid | 35.79 | 44.74 |
| VIT_13s0019g00480.t01 | Wine grape | nucleus | 40.0 | 43.18 |
| KRH01600 | Soybean | cytosol, extracellular, nucleus | 38.95 | 42.29 |
| KRG90559 | Soybean | nucleus | 37.89 | 41.62 |
| KRH70509 | Soybean | nucleus | 38.95 | 41.11 |
| Solyc05g054660.1.1 | Tomato | nucleus, plastid | 35.26 | 40.12 |
| TraesCS5B01G489400.1 | Wheat | nucleus | 33.68 | 40.0 |
| KRH36195 | Soybean | extracellular | 37.89 | 38.92 |
| TraesCS5B01G490400.1 | Wheat | nucleus | 24.74 | 35.34 |
| TraesCS3B01G389000.1 | Wheat | nucleus | 37.89 | 34.62 |
| TraesCS5B01G490900.1 | Wheat | nucleus | 24.74 | 34.31 |
| TraesCS5B01G490500.1 | Wheat | nucleus | 23.68 | 33.58 |
| TraesCS5B01G491300.1 | Wheat | nucleus | 23.68 | 33.09 |
| TraesCS5B01G490700.1 | Wheat | nucleus | 23.68 | 33.09 |
| TraesCS5B01G491100.1 | Wheat | nucleus | 23.16 | 32.35 |
| TraesCS5B01G491000.1 | Wheat | nucleus | 26.84 | 31.68 |
| PGSC0003DMT400060463 | Potato | nucleus | 33.68 | 30.77 |
| TraesCS5B01G490800.1 | Wheat | nucleus | 26.84 | 29.82 |
| TraesCS5B01G490300.1 | Wheat | nucleus | 24.74 | 29.01 |
| TraesCS5B01G490100.1 | Wheat | nucleus | 26.32 | 28.25 |
| TraesCS5B01G491200.1 | Wheat | nucleus | 26.84 | 28.02 |
| TraesCS3B01G389100.1 | Wheat | nucleus | 37.89 | 28.02 |
| TraesCS5B01G489800.1 | Wheat | nucleus | 25.26 | 27.43 |
| TraesCS5B01G490000.1 | Wheat | nucleus | 25.26 | 27.12 |
| TraesCS3B01G389400.1 | Wheat | nucleus | 27.89 | 27.04 |
| TraesCS5B01G490600.1 | Wheat | nucleus | 25.79 | 24.38 |
| TraesCS1B01G295400.1 | Wheat | nucleus | 26.32 | 21.1 |
| TraesCS4B01G143400.1 | Wheat | nucleus | 15.79 | 18.52 |
| TraesCS6B01G448900.1 | Wheat | nucleus | 34.74 | 18.08 |
| TraesCS2B01G020300.1 | Wheat | nucleus | 33.16 | 17.26 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G053000.1 | EnsemblPlantsGene:TraesCS1B01G053000 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF162 | PFAM:PF13912 |
| PFscan:PS50157 | ScanProsite:PS00028 | SEG:seg | SMART:SM00355 | SUPFAM:SSF57667 | MapMan:15.5.15 |
Description
No Description!
Coordinates
chr1B:-:33856815..33857387
Molecular Weight (calculated)
20184.1 Da
IEP (calculated)
6.778
GRAVY (calculated)
-0.280
Length
190 amino acids
Sequence
(BLAST)
(BLAST)
001: MMKRFAFEER DMARMLLLVS REQAMPVAAR GDRAPERAFV CKTCDRVFPS FQALGGHRAS HKKPRLDGDG DFKPKMHGCS ICGLEFAVGQ ALGGHMRRHR
101: AMVAGGDGVT AGPPAKTTDN LEDSNNAVVV VGSGGGIKPG LWLDLNHPPC DDVGGSDVDH GECGHDTAAA GYTFHQFLDA GAMAVDCVGY
101: AMVAGGDGVT AGPPAKTTDN LEDSNNAVVV VGSGGGIKPG LWLDLNHPPC DDVGGSDVDH GECGHDTAAA GYTFHQFLDA GAMAVDCVGY
001: MVARSEEIVI VEEDTTAKCL MLLSRVGECG GGCGGDERVF RCKTCLKEFS SFQALGGHRA SHKKLINSDN PSLLGSLSNK KTKTSHPCPI CGVKFPMGQA
101: LGGHMRRHRN EKVSGSLVTR SFLPETTTVT ALKKFSSGKR VACLDLDLDS MESLVNWKLE LGRTISWS
101: LGGHMRRHRN EKVSGSLVTR SFLPETTTVT ALKKFSSGKR VACLDLDLDS MESLVNWKLE LGRTISWS
Arabidopsis Description
ZAT7ZAT7 [Source:UniProtKB/TrEMBL;Acc:A0A178VI57]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.