Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G489800.1 | Wheat | nucleus | 93.75 | 95.54 |
| TraesCS5A01G476500.1 | Wheat | nucleus | 93.12 | 94.3 |
| HORVU5Hr1G112820.1 | Barley | nucleus | 85.0 | 85.53 |
| EER90627 | Sorghum | cytosol, mitochondrion, nucleus | 50.0 | 54.79 |
| Zm00001d034639_P001 | Maize | nucleus | 48.75 | 52.0 |
| GSMUA_Achr11P... | Banana | nucleus | 41.88 | 44.37 |
| GSMUA_Achr6P33180_001 | Banana | nucleus | 36.25 | 43.28 |
| PGSC0003DMT400060523 | Potato | mitochondrion | 35.62 | 41.3 |
| VIT_06s0004g04180.t01 | Wine grape | nucleus | 40.0 | 40.25 |
| Solyc05g054650.1.1 | Tomato | plastid | 36.88 | 38.82 |
| VIT_13s0019g00480.t01 | Wine grape | nucleus | 41.25 | 37.5 |
| GSMUA_Achr5P28550_001 | Banana | nucleus | 40.0 | 37.43 |
| KRH01600 | Soybean | cytosol, extracellular, nucleus | 40.62 | 37.14 |
| TraesCS5B01G490400.1 | Wheat | nucleus | 30.62 | 36.84 |
| KRG90559 | Soybean | nucleus | 39.38 | 36.42 |
| KRH70509 | Soybean | nucleus | 40.62 | 36.11 |
| Solyc05g054660.1.1 | Tomato | nucleus, plastid | 36.88 | 35.33 |
| TraesCS5B01G491300.1 | Wheat | nucleus | 30.0 | 35.29 |
| TraesCS4B01G203400.1 | Wheat | nucleus | 39.38 | 34.43 |
| KRH36195 | Soybean | extracellular | 39.38 | 34.05 |
| TraesCS1B01G053000.1 | Wheat | nucleus | 40.0 | 33.68 |
| TraesCS3B01G389000.1 | Wheat | nucleus | 43.12 | 33.17 |
| TraesCS5B01G491100.1 | Wheat | nucleus | 28.12 | 33.09 |
| TraesCS5B01G490700.1 | Wheat | nucleus | 28.12 | 33.09 |
| TraesCS5B01G490900.1 | Wheat | nucleus | 28.12 | 32.85 |
| TraesCS5B01G490500.1 | Wheat | nucleus | 27.5 | 32.84 |
| TraesCS1B01G053200.1 | Wheat | nucleus | 38.12 | 32.28 |
| TraesCS1B01G053100.1 | Wheat | nucleus | 36.88 | 31.22 |
| TraesCS5B01G491000.1 | Wheat | nucleus | 30.0 | 29.81 |
| TraesCS5B01G490800.1 | Wheat | nucleus | 30.62 | 28.66 |
| TraesCS3B01G389400.1 | Wheat | nucleus | 35.0 | 28.57 |
| TraesCS5B01G490300.1 | Wheat | nucleus | 28.12 | 27.78 |
| TraesCS5B01G490100.1 | Wheat | nucleus | 30.62 | 27.68 |
| TraesCS5B01G489800.1 | Wheat | nucleus | 30.0 | 27.43 |
| PGSC0003DMT400060463 | Potato | nucleus | 35.62 | 27.4 |
| TraesCS5B01G490000.1 | Wheat | nucleus | 29.38 | 26.55 |
| TraesCS3B01G389100.1 | Wheat | nucleus | 40.62 | 25.29 |
| TraesCS5B01G491200.1 | Wheat | nucleus | 28.75 | 25.27 |
| TraesCS5B01G490600.1 | Wheat | nucleus | 29.38 | 23.38 |
| TraesCS1B01G295400.1 | Wheat | nucleus | 33.75 | 22.78 |
| TraesCS4B01G143400.1 | Wheat | nucleus | 20.0 | 19.75 |
| TraesCS6B01G448900.1 | Wheat | nucleus | 36.25 | 15.89 |
| TraesCS2B01G020300.1 | Wheat | nucleus | 33.75 | 14.79 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G489400.1 | EnsemblPlantsGene:TraesCS5B01G489400 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF202 | PFAM:PF13912 |
| PFscan:PS50157 | ScanProsite:PS00028 | SEG:seg | SMART:SM00355 | SUPFAM:SSF57667 | MapMan:15.5.15 |
Description
No Description!
Coordinates
chr5B:-:659402951..659403650
Molecular Weight (calculated)
17129.5 Da
IEP (calculated)
8.377
GRAVY (calculated)
-0.399
Length
160 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRLRFGEEA EVDGAAIAHE VMMLLAARSA AMGGGEPVAV ARPRAFECKT CNRQFPSFQA LGGHRASHKR PRGDPISEQA PAPAPVPARR HGCTVCGVEF
101: ALGQALGGHM RRHRAHEQEG STHGPVVAER EPGETRRGLL LGLDLNATPA EQAMDLSLWA
101: ALGQALGGHM RRHRAHEQEG STHGPVVAER EPGETRRGLL LGLDLNATPA EQAMDLSLWA
001: MVARSEEVEI VEDTAAKCLM LLSRVGECGG GGEKRVFRCK TCLKEFSSFQ ALGGHRASHK KLINSSDPSL LGSLSNKKTK TATSHPCPIC GVEFPMGQAL
101: GGHMRRHRSE KASPGTLVTR SFLPETTTVT TLKKSSSGKR VACLDLDSME SLVNWKLELG RTIS
101: GGHMRRHRSE KASPGTLVTR SFLPETTTVT TLKKSSSGKR VACLDLDSME SLVNWKLELG RTIS
Arabidopsis Description
ZAT8Zinc finger protein ZAT8 [Source:UniProtKB/Swiss-Prot;Acc:Q9LX85]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.