Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G141500.1 | Wheat | nucleus | 62.35 | 63.52 |
| TraesCS4A01G174100.1 | Wheat | nucleus | 61.11 | 63.06 |
| Os11t0702400-01 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 42.59 | 40.59 |
| EES10296 | Sorghum | plastid | 40.74 | 36.07 |
| Zm00001d045211_P001 | Maize | nucleus | 38.89 | 35.39 |
| TraesCS5B01G490500.1 | Wheat | nucleus | 25.31 | 30.6 |
| TraesCS5B01G490900.1 | Wheat | nucleus | 25.31 | 29.93 |
| TraesCS5B01G491100.1 | Wheat | nucleus | 24.69 | 29.41 |
| TraesCS5B01G491300.1 | Wheat | nucleus | 24.69 | 29.41 |
| TraesCS5B01G490700.1 | Wheat | nucleus | 24.69 | 29.41 |
| TraesCS5B01G490400.1 | Wheat | nucleus | 24.07 | 29.32 |
| TraesCS5B01G491000.1 | Wheat | nucleus | 24.69 | 24.84 |
| TraesCS5B01G490300.1 | Wheat | nucleus | 24.07 | 24.07 |
| TraesCS5B01G490800.1 | Wheat | nucleus | 25.31 | 23.98 |
| TraesCS5B01G489800.1 | Wheat | nucleus | 25.31 | 23.43 |
| TraesCS5B01G491200.1 | Wheat | nucleus | 25.31 | 22.53 |
| PGSC0003DMT400060523 | Potato | mitochondrion | 18.52 | 21.74 |
| TraesCS5B01G490100.1 | Wheat | nucleus | 23.46 | 21.47 |
| TraesCS5B01G490000.1 | Wheat | nucleus | 23.46 | 21.47 |
| TraesCS5B01G490600.1 | Wheat | nucleus | 25.31 | 20.4 |
| GSMUA_Achr10P... | Banana | nucleus | 23.46 | 20.21 |
| VIT_06s0004g04180.t01 | Wine grape | nucleus | 19.75 | 20.13 |
| TraesCS5B01G489400.1 | Wheat | nucleus | 19.75 | 20.0 |
| Solyc05g054650.1.1 | Tomato | plastid | 18.52 | 19.74 |
| Solyc05g054660.1.1 | Tomato | nucleus, plastid | 19.14 | 18.56 |
| KRG90559 | Soybean | nucleus | 19.75 | 18.5 |
| VIT_13s0019g00480.t01 | Wine grape | nucleus | 19.75 | 18.18 |
| TraesCS4B01G203400.1 | Wheat | nucleus | 19.75 | 17.49 |
| TraesCS3B01G389000.1 | Wheat | nucleus | 22.22 | 17.31 |
| KRH01600 | Soybean | cytosol, extracellular, nucleus | 18.52 | 17.14 |
| KRH36195 | Soybean | extracellular | 19.14 | 16.76 |
| KRH70509 | Soybean | nucleus | 18.52 | 16.67 |
| TraesCS1B01G053100.1 | Wheat | nucleus | 19.14 | 16.4 |
| TraesCS3B01G389400.1 | Wheat | nucleus | 19.14 | 15.82 |
| TraesCS1B01G053000.1 | Wheat | nucleus | 18.52 | 15.79 |
| TraesCS1B01G053200.1 | Wheat | nucleus | 17.9 | 15.34 |
| TraesCS1B01G295400.1 | Wheat | nucleus | 21.6 | 14.77 |
| TraesCS3B01G389100.1 | Wheat | nucleus | 21.6 | 13.62 |
| PGSC0003DMT400060463 | Potato | nucleus | 17.28 | 13.46 |
| TraesCS2B01G020300.1 | Wheat | nucleus | 22.84 | 10.14 |
| TraesCS6B01G448900.1 | Wheat | nucleus | 20.99 | 9.32 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G143400.1 | EnsemblPlantsGene:TraesCS4B01G143400 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | InterPro:IPR013087 |
| InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF171 | PFAM:PF13912 | PFscan:PS50157 |
| ScanProsite:PS00028 | SEG:seg | SUPFAM:SSF57667 | MapMan:15.5.15 | : | : |
Description
No Description!
Coordinates
chr4B:+:190170601..190171089
Molecular Weight (calculated)
18203.3 Da
IEP (calculated)
12.454
GRAVY (calculated)
-0.596
Length
162 amino acids
Sequence
(BLAST)
(BLAST)
001: MTMDVASGDT RSPIKSIELL LKLSSPASSS RVIGKNKRVQ LQAAGGTYEC RTCGRRFVTF QALGGHRTSH KRPRVRAHSL DLLLGARPGK ARARCSCTAA
101: ARAARRSPRG RRSAGTCAAT GWHWPRRRGW RRPRRRRPRA CLCLVSIVRR ERKIWWNSCC IA
101: ARAARRSPRG RRSAGTCAAT GWHWPRRRGW RRPRRRRPRA CLCLVSIVRR ERKIWWNSCC IA
001: MKRERSDFEE SLKNIDIAKC LMILAQTSMV KQIGLNQHTE SHTSNQFECK TCNKRFSSFQ ALGGHRASHK KPKLTVEQKD VKHLSNDYKG NHFHKCSICS
101: QSFGTGQALG GHMRRHRSSM TVEPSFISPM IPSMPVLKRC GSSKRILSLD LNLTPLENDL EYIFGKTFVP KIDMKFVL
101: QSFGTGQALG GHMRRHRSSM TVEPSFISPM IPSMPVLKRC GSSKRILSLD LNLTPLENDL EYIFGKTFVP KIDMKFVL
Arabidopsis Description
ZAT11ZAT11 [Source:UniProtKB/TrEMBL;Acc:A0A178VNJ8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.