Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G356600.1 | Wheat | nucleus | 91.33 | 93.72 |
| TraesCS3D01G350700.1 | Wheat | nucleus | 88.27 | 92.02 |
| Os01t0839100-01 | Rice | nucleus | 61.73 | 70.76 |
| OQU87825 | Sorghum | nucleus | 65.82 | 69.35 |
| Zm00001d042933_P001 | Maize | nucleus | 59.18 | 63.74 |
| Zm00001d012427_P001 | Maize | nucleus | 54.59 | 63.31 |
| TraesCS5B01G490700.1 | Wheat | nucleus | 25.0 | 36.03 |
| PGSC0003DMT400060523 | Potato | mitochondrion | 25.0 | 35.51 |
| TraesCS5B01G490900.1 | Wheat | nucleus | 24.49 | 35.04 |
| TraesCS5B01G489400.1 | Wheat | nucleus | 28.57 | 35.0 |
| TraesCS5B01G490400.1 | Wheat | nucleus | 23.47 | 34.59 |
| TraesCS5B01G491300.1 | Wheat | nucleus | 23.98 | 34.56 |
| TraesCS5B01G491100.1 | Wheat | nucleus | 23.98 | 34.56 |
| VIT_13s0019g00480.t01 | Wine grape | nucleus | 29.59 | 32.95 |
| KRH01600 | Soybean | cytosol, extracellular, nucleus | 29.08 | 32.57 |
| Solyc05g054650.1.1 | Tomato | plastid | 25.0 | 32.24 |
| TraesCS5B01G490500.1 | Wheat | nucleus | 21.94 | 32.09 |
| KRG90559 | Soybean | nucleus | 28.06 | 31.79 |
| VIT_06s0004g04180.t01 | Wine grape | nucleus | 25.51 | 31.45 |
| KRH70509 | Soybean | nucleus | 28.57 | 31.11 |
| TraesCS4B01G203400.1 | Wheat | nucleus | 28.57 | 30.6 |
| TraesCS5B01G491000.1 | Wheat | nucleus | 25.0 | 30.43 |
| TraesCS5B01G490800.1 | Wheat | nucleus | 26.02 | 29.82 |
| KRH36195 | Soybean | extracellular | 28.06 | 29.73 |
| TraesCS5B01G490100.1 | Wheat | nucleus | 26.53 | 29.38 |
| Solyc05g054660.1.1 | Tomato | nucleus, plastid | 25.0 | 29.34 |
| TraesCS5B01G489800.1 | Wheat | nucleus | 26.02 | 29.14 |
| TraesCS1B01G053200.1 | Wheat | nucleus | 28.06 | 29.1 |
| TraesCS5B01G490300.1 | Wheat | nucleus | 23.98 | 29.01 |
| TraesCS1B01G053100.1 | Wheat | nucleus | 27.55 | 28.57 |
| TraesCS5B01G490000.1 | Wheat | nucleus | 25.51 | 28.25 |
| TraesCS1B01G053000.1 | Wheat | nucleus | 27.04 | 27.89 |
| TraesCS3B01G389000.1 | Wheat | nucleus | 29.08 | 27.4 |
| TraesCS5B01G491200.1 | Wheat | nucleus | 25.0 | 26.92 |
| TraesCS5B01G490600.1 | Wheat | nucleus | 25.51 | 24.88 |
| TraesCS3B01G389100.1 | Wheat | nucleus | 30.61 | 23.35 |
| TraesCS1B01G295400.1 | Wheat | nucleus | 27.55 | 22.78 |
| PGSC0003DMT400060463 | Potato | nucleus | 23.47 | 22.12 |
| TraesCS4B01G143400.1 | Wheat | nucleus | 15.82 | 19.14 |
| TraesCS6B01G448900.1 | Wheat | nucleus | 31.12 | 16.71 |
| TraesCS2B01G020300.1 | Wheat | nucleus | 31.12 | 16.71 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G389400.1 | EnsemblPlantsGene:TraesCS3B01G389400 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF206 | PFAM:PF13912 |
| PFscan:PS50157 | ScanProsite:PS00028 | SEG:seg | SMART:SM00355 | SUPFAM:SSF57667 | MapMan:15.5.15 |
Description
No Description!
Coordinates
chr3B:+:612799731..612800321
Molecular Weight (calculated)
20640.1 Da
IEP (calculated)
6.504
GRAVY (calculated)
-0.498
Length
196 amino acids
Sequence
(BLAST)
(BLAST)
001: MTLTREEAHE SKEMESLRVH ADALLSLASP AASSTATAGS KPVTAATTTV AGRRALAAEG VFECKTCSKR FTSFQALGGH RTSHTRLQAR MLLHDQTADQ
101: GAAERDRARV HECAVCGLEF SMGQALGGHM RRHRGEAPPG PSTSSAAVHG DASSGGTQQQ EVMPDLNYPP MDDCGGDGQE TSADRSSGHQ LLDLLV
101: GAAERDRARV HECAVCGLEF SMGQALGGHM RRHRGEAPPG PSTSSAAVHG DASSGGTQQQ EVMPDLNYPP MDDCGGDGQE TSADRSSGHQ LLDLLV
001: MVARSEEIVI VEEDTTAKCL MLLSRVGECG GGCGGDERVF RCKTCLKEFS SFQALGGHRA SHKKLINSDN PSLLGSLSNK KTKTSHPCPI CGVKFPMGQA
101: LGGHMRRHRN EKVSGSLVTR SFLPETTTVT ALKKFSSGKR VACLDLDLDS MESLVNWKLE LGRTISWS
101: LGGHMRRHRN EKVSGSLVTR SFLPETTTVT ALKKFSSGKR VACLDLDLDS MESLVNWKLE LGRTISWS
Arabidopsis Description
ZAT7ZAT7 [Source:UniProtKB/TrEMBL;Acc:A0A178VI57]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.