Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G086790.2 | Barley | nucleus | 64.98 | 84.34 |
| TraesCS3B01G389000.1 | Wheat | nucleus | 64.2 | 79.33 |
| TraesCS3D01G350200.1 | Wheat | nucleus | 61.87 | 77.18 |
| TraesCS3A01G356200.1 | Wheat | nucleus | 71.6 | 73.9 |
| Os01t0838600-00 | Rice | nucleus | 52.53 | 62.21 |
| EES03852 | Sorghum | cytosol | 49.81 | 55.41 |
| Zm00001d012430_P001 | Maize | nucleus | 45.14 | 54.98 |
| Zm00001d042934_P001 | Maize | nucleus | 45.53 | 52.0 |
| PGSC0003DMT400060523 | Potato | mitochondrion | 26.46 | 49.28 |
| VIT_06s0004g04180.t01 | Wine grape | nucleus | 29.96 | 48.43 |
| Solyc05g054650.1.1 | Tomato | plastid | 26.85 | 45.39 |
| GSMUA_Achr11P... | Banana | nucleus | 25.68 | 43.71 |
| VIT_13s0019g00480.t01 | Wine grape | nucleus | 29.57 | 43.18 |
| Solyc05g054660.1.1 | Tomato | nucleus, plastid | 28.02 | 43.11 |
| KRH01600 | Soybean | cytosol, extracellular, nucleus | 29.18 | 42.86 |
| GSMUA_Achr6P33180_001 | Banana | nucleus | 21.79 | 41.79 |
| KRH70509 | Soybean | nucleus | 29.18 | 41.67 |
| GSMUA_Achr5P28550_001 | Banana | nucleus | 27.24 | 40.94 |
| TraesCS5B01G489400.1 | Wheat | nucleus | 25.29 | 40.62 |
| TraesCS4B01G203400.1 | Wheat | nucleus | 28.4 | 39.89 |
| KRG90559 | Soybean | nucleus | 26.85 | 39.88 |
| TraesCS1B01G053000.1 | Wheat | nucleus | 28.02 | 37.89 |
| TraesCS5B01G490400.1 | Wheat | nucleus | 19.07 | 36.84 |
| TraesCS5B01G491300.1 | Wheat | nucleus | 19.46 | 36.76 |
| TraesCS5B01G490700.1 | Wheat | nucleus | 19.46 | 36.76 |
| KRH36195 | Soybean | extracellular | 26.46 | 36.76 |
| TraesCS1B01G053100.1 | Wheat | nucleus | 26.85 | 36.51 |
| TraesCS1B01G053200.1 | Wheat | nucleus | 26.46 | 35.98 |
| TraesCS5B01G490900.1 | Wheat | nucleus | 18.68 | 35.04 |
| TraesCS5B01G491100.1 | Wheat | nucleus | 18.29 | 34.56 |
| TraesCS5B01G490500.1 | Wheat | nucleus | 17.9 | 34.33 |
| PGSC0003DMT400060463 | Potato | nucleus | 26.07 | 32.21 |
| TraesCS5B01G491000.1 | Wheat | nucleus | 19.46 | 31.06 |
| TraesCS3B01G389400.1 | Wheat | nucleus | 23.35 | 30.61 |
| TraesCS5B01G490300.1 | Wheat | nucleus | 18.68 | 29.63 |
| TraesCS5B01G490800.1 | Wheat | nucleus | 19.46 | 29.24 |
| TraesCS5B01G490000.1 | Wheat | nucleus | 19.46 | 28.25 |
| TraesCS5B01G489800.1 | Wheat | nucleus | 19.07 | 28.0 |
| TraesCS5B01G490100.1 | Wheat | nucleus | 19.07 | 27.68 |
| TraesCS5B01G491200.1 | Wheat | nucleus | 19.46 | 27.47 |
| TraesCS5B01G490600.1 | Wheat | nucleus | 20.62 | 26.37 |
| TraesCS1B01G295400.1 | Wheat | nucleus | 21.79 | 23.63 |
| TraesCS4B01G143400.1 | Wheat | nucleus | 13.62 | 21.6 |
| TraesCS6B01G448900.1 | Wheat | nucleus | 27.24 | 19.18 |
| TraesCS2B01G020300.1 | Wheat | nucleus | 24.12 | 16.99 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G389100.1 | EnsemblPlantsGene:TraesCS3B01G389100 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | InterPro:IPR013087 |
| InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF162 | PFAM:PF13912 | PFscan:PS50157 |
| ScanProsite:PS00028 | SEG:seg | SMART:SM00355 | SUPFAM:SSF57667 | MapMan:15.5.15 | : |
Description
No Description!
Coordinates
chr3B:-:612359543..612360316
Molecular Weight (calculated)
27645.0 Da
IEP (calculated)
8.155
GRAVY (calculated)
-0.400
Length
257 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKRGRGVWD MELGSLDTTR LLMLLAQQHQ HQHHHRGVAE AAQAMTGGRV FQCKTCNRQF PTFQALGGHR ASHKRPRLHH PPPQHALVGV DDDAALCLGR
101: RAPQAPPQPA RPRVHECPIC GLEFAVGQAL GGHMRRHRVE AEAEAGANAP SSKAAAATEM VVASCDDAGI CLDLNLTPSE NCAKCKSAAV LRAATGQGVH
201: KALGGHMSRY CAEGETEAHA TSAKDSCDMF GRRQRYLPLS LDLCGRLEDT DISVSIC
101: RAPQAPPQPA RPRVHECPIC GLEFAVGQAL GGHMRRHRVE AEAEAGANAP SSKAAAATEM VVASCDDAGI CLDLNLTPSE NCAKCKSAAV LRAATGQGVH
201: KALGGHMSRY CAEGETEAHA TSAKDSCDMF GRRQRYLPLS LDLCGRLEDT DISVSIC
001: MKRERSDFEE SLKNIDIAKC LMILAQTSMV KQIGLNQHTE SHTSNQFECK TCNKRFSSFQ ALGGHRASHK KPKLTVEQKD VKHLSNDYKG NHFHKCSICS
101: QSFGTGQALG GHMRRHRSSM TVEPSFISPM IPSMPVLKRC GSSKRILSLD LNLTPLENDL EYIFGKTFVP KIDMKFVL
101: QSFGTGQALG GHMRRHRSSM TVEPSFISPM IPSMPVLKRC GSSKRILSLD LNLTPLENDL EYIFGKTFVP KIDMKFVL
Arabidopsis Description
ZAT11ZAT11 [Source:UniProtKB/TrEMBL;Acc:A0A178VNJ8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.