Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_14s0066g02330.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G04390.1 | VIT_14s0066g02330.t01 | AT3G01320.1 | 19962994 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_06s0061g00760.t01 | Wine grape | nucleus | 52.9 | 50.52 |
| VIT_06s0004g04180.t01 | Wine grape | nucleus | 27.54 | 47.8 |
| KRH19960 | Soybean | nucleus | 49.28 | 47.22 |
| CDY11027 | Canola | nucleus | 39.49 | 47.19 |
| GSMUA_Achr1P03310_001 | Banana | nucleus | 28.26 | 46.71 |
| HORVU4Hr1G082500.1 | Barley | nucleus | 11.59 | 46.38 |
| PGSC0003DMT400009871 | Potato | nucleus | 49.28 | 45.64 |
| KRH32562 | Soybean | nucleus | 48.91 | 45.3 |
| Bra009525.1-P | Field mustard | nucleus | 43.48 | 45.28 |
| HORVU5Hr1G095320.1 | Barley | nucleus | 11.23 | 44.93 |
| HORVU3Hr1G057300.1 | Barley | nucleus | 11.23 | 44.93 |
| CDX70302 | Canola | nucleus | 43.12 | 44.91 |
| CDY10376 | Canola | nucleus | 42.75 | 44.53 |
| HORVU2Hr1G122100.1 | Barley | nucleus, plastid | 12.32 | 44.16 |
| Solyc09g008440.1.1 | Tomato | nucleus | 49.28 | 43.87 |
| CDY04886 | Canola | nucleus | 42.39 | 43.66 |
| Bra028831.1-P | Field mustard | nucleus | 42.39 | 43.66 |
| VIT_13s0019g00480.t01 | Wine grape | nucleus | 27.54 | 43.18 |
| VIT_13s0019g05170.t01 | Wine grape | nucleus | 46.74 | 42.72 |
| AT5G03510.1 | Thale cress | nucleus | 44.93 | 42.47 |
| CDY44371 | Canola | nucleus | 40.94 | 42.16 |
| CDX80870 | Canola | nucleus | 38.77 | 42.13 |
| HORVU1Hr1G012760.1 | Barley | nucleus | 10.51 | 42.03 |
| CDY11255 | Canola | nucleus | 38.41 | 41.73 |
| Bra005766.1-P | Field mustard | nucleus | 40.58 | 40.58 |
| HORVU1Hr1G020710.1 | Barley | nucleus | 11.23 | 40.26 |
| HORVU5Hr1G095390.1 | Barley | nucleus | 10.87 | 38.96 |
| HORVU5Hr1G095330.1 | Barley | nucleus | 10.87 | 38.96 |
| Zm00001d036330_P001 | Maize | nucleus | 33.33 | 37.4 |
| CDY41350 | Canola | nucleus, plastid | 33.33 | 36.51 |
| CDX70228 | Canola | nucleus | 42.75 | 36.42 |
| CDY71034 | Canola | nucleus | 32.25 | 36.33 |
| CDY44852 | Canola | nucleus | 42.75 | 36.31 |
| KXG20985 | Sorghum | nucleus, plastid | 35.14 | 35.27 |
| CDY00945 | Canola | nucleus | 42.75 | 34.91 |
| CDY08602 | Canola | nucleus | 42.39 | 34.62 |
| CDY11288 | Canola | nucleus | 40.94 | 34.35 |
| AT5G04390.1 | Thale cress | nucleus | 44.93 | 34.25 |
| Bra009457.1-P | Field mustard | nucleus | 42.75 | 34.2 |
| CDY61764 | Canola | nucleus | 41.67 | 33.82 |
| Bra034116.1-P | Field mustard | plastid | 34.06 | 33.81 |
| CDY58436 | Canola | nucleus | 41.3 | 33.53 |
| Zm00001d051865_P001 | Maize | nucleus | 39.13 | 32.73 |
| Bra028791.1-P | Field mustard | nucleus | 41.3 | 32.39 |
| Bra005803.1-P | Field mustard | nucleus | 41.67 | 32.03 |
| Os02t0823900-00 | Rice | cytosol, nucleus, peroxisome | 39.13 | 31.4 |
| Bra029843.1-P | Field mustard | nucleus | 36.96 | 31.38 |
| Zm00001d004439_P001 | Maize | nucleus | 40.58 | 31.2 |
| TraesCS2A01G002400.1 | Wheat | nucleus | 38.41 | 30.99 |
| Os04t0162500-01 | Rice | vacuole | 32.25 | 30.8 |
| Zm00001d024866_P001 | Maize | nucleus | 40.22 | 30.33 |
| AT3G10470.1 | Thale cress | nucleus | 43.48 | 30.15 |
| TraesCS6A01G404600.1 | Wheat | nucleus | 39.86 | 29.97 |
| HORVU6Hr1G092750.1 | Barley | nucleus | 39.13 | 29.92 |
| TraesCS6B01G448900.1 | Wheat | nucleus | 39.49 | 29.86 |
| CDX89591 | Canola | nucleus | 22.46 | 29.81 |
| TraesCS6D01G387900.1 | Wheat | nucleus | 39.49 | 29.78 |
| EES10410 | Sorghum | nucleus | 42.75 | 29.43 |
| TraesCS2B01G020300.1 | Wheat | nucleus | 38.04 | 28.77 |
| CDY42128 | Canola | nucleus | 21.74 | 26.91 |
| EES07783 | Sorghum | nucleus | 38.04 | 26.85 |
| CDY05027 | Canola | nucleus | 14.49 | 23.95 |
Protein Annotations
| EntrezGene:100252049 | wikigene:100252049 | MapMan:15.5.15 | UniProt:A5ARW4 | EMBL:AM433353 | ProteinID:CAN64839 |
| ProteinID:CAN64839.1 | ProteinID:CCB55351 | ProteinID:CCB55351.1 | EMBL:FN595991 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:IPR013087 |
| EntrezGene:LOC100252049 | wikigene:LOC100252049 | PFAM:PF13912 | ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR26374 |
| PANTHER:PTHR26374:SF308 | SMART:SM00355 | SUPFAM:SSF57667 | TIGR:TC56449 | UniParc:UPI000151F4C9 | ArrayExpress:VIT_08s0007g04770 |
| EnsemblPlantsGene:VIT_08s0007g04770 | EnsemblPlants:VIT_08s0007g04770.t01 | unigene:Vvi.12262 | RefSeq:XP_002267645 | RefSeq:XP_002267645.1 | InterPro:Znf_C2H2_sf |
| InterPro:Znf_C2H2_type | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr8:-:18752441..18753470
Molecular Weight (calculated)
30178.1 Da
IEP (calculated)
6.844
GRAVY (calculated)
-0.709
Length
276 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVQEEVMGS NDQTHVIKGK RTKRQRLSSP LALTMASSSS SGEEGDGGGR VSDNSGGVDR ATTSPTTSTD HEFAESTEEE EDMANCLILL AQGQSRKVAV
101: PAAAATSSKA TGFYVYQCKT CYRCFPSFQA LGGHRASHKR PKAVTEEKRT WALMEDEYDQ FNHNSTALSL QIPNRGLYSN NKSKVHECSI CGAEFSSGQA
201: LGGHMRRHRT FTGPPPTMPM ATSSPESQEA KKPRNILQLD LNLPAPEDDH RESKFPFATK EQALVFSASP LVDCHY
101: PAAAATSSKA TGFYVYQCKT CYRCFPSFQA LGGHRASHKR PKAVTEEKRT WALMEDEYDQ FNHNSTALSL QIPNRGLYSN NKSKVHECSI CGAEFSSGQA
201: LGGHMRRHRT FTGPPPTMPM ATSSPESQEA KKPRNILQLD LNLPAPEDDH RESKFPFATK EQALVFSASP LVDCHY
001: MMMGQDEVGS DQTQIIKGKR TKRQRSSSTF VVTAATTVTS TSSSAGGSGG ERAVSDEYNS AVSSPVTTDC TQEEEDMAIC LIMLARGTVL PSPDLKNSRK
101: IHQKISSENS SFYVYECKTC NRTFSSFQAL GGHRASHKKP RTSTEEKTRL PLTQPKSSAS EEGQNSHFKV SGSALASQAS NIINKANKVH ECSICGSEFT
201: SGQALGGHMR RHRTAVTTIS PVAATAEVSR NSTEEEIEIN IGRSMEQQRK YLPLDLNLPA PEDDLRESKF QGIVFSATPA LIDCHY
101: IHQKISSENS SFYVYECKTC NRTFSSFQAL GGHRASHKKP RTSTEEKTRL PLTQPKSSAS EEGQNSHFKV SGSALASQAS NIINKANKVH ECSICGSEFT
201: SGQALGGHMR RHRTAVTTIS PVAATAEVSR NSTEEEIEIN IGRSMEQQRK YLPLDLNLPA PEDDLRESKF QGIVFSATPA LIDCHY
Arabidopsis Description
ZAT5Zinc finger protein ZAT5 [Source:UniProtKB/Swiss-Prot;Acc:Q681X4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.