Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009525.1-P | Field mustard | nucleus | 96.98 | 96.98 |
| CDY10376 | Canola | nucleus | 93.96 | 93.96 |
| CDY11027 | Canola | nucleus | 81.89 | 93.94 |
| CDX80870 | Canola | nucleus | 76.98 | 80.31 |
| CDY04886 | Canola | nucleus | 81.13 | 80.22 |
| CDY11255 | Canola | nucleus | 76.6 | 79.92 |
| CDY44371 | Canola | nucleus | 79.25 | 78.36 |
| AT5G03510.1 | Thale cress | nucleus | 81.51 | 73.97 |
| VIT_08s0007g04770.t01 | Wine grape | nucleus | 44.91 | 43.12 |
| KRH67769 | Soybean | nucleus | 32.83 | 40.28 |
| CDY15775 | Canola | nucleus | 21.89 | 38.67 |
| CDY04582 | Canola | nucleus | 21.89 | 38.67 |
| GSMUA_Achr1P03310_001 | Banana | nucleus | 24.15 | 38.32 |
| CDY30501 | Canola | nucleus | 35.85 | 38.0 |
| CDX77198 | Canola | nucleus | 21.13 | 37.84 |
| CDY31725 | Canola | nucleus | 21.13 | 37.84 |
| CDX91362 | Canola | nucleus | 25.66 | 37.78 |
| CDX74961 | Canola | nucleus | 25.66 | 37.78 |
| CDY70037 | Canola | nucleus | 35.85 | 37.7 |
| HORVU2Hr1G122100.1 | Barley | nucleus, plastid | 10.94 | 37.66 |
| KRH19960 | Soybean | nucleus | 40.75 | 37.5 |
| CDX71375 | Canola | nucleus | 35.85 | 37.25 |
| CDY04544 | Canola | nucleus | 35.85 | 37.11 |
| PGSC0003DMT400009871 | Potato | nucleus | 41.51 | 36.91 |
| CDX71073 | Canola | nucleus | 21.89 | 36.71 |
| CDY30857 | Canola | nucleus | 23.02 | 36.53 |
| CDX88724 | Canola | nucleus | 21.89 | 36.48 |
| CDX93380 | Canola | nucleus | 24.53 | 36.31 |
| CDY09252 | Canola | nucleus | 21.51 | 36.31 |
| CDY31593 | Canola | nucleus | 21.89 | 36.25 |
| KRH32562 | Soybean | nucleus | 40.75 | 36.24 |
| CDY18446 | Canola | nucleus | 24.53 | 36.11 |
| CDX80226 | Canola | nucleus | 21.89 | 36.02 |
| CDX76199 | Canola | nucleus | 23.4 | 35.63 |
| Solyc09g008440.1.1 | Tomato | nucleus | 41.51 | 35.48 |
| CDY52747 | Canola | nucleus | 22.26 | 35.12 |
| CDY07578 | Canola | nucleus | 22.26 | 35.12 |
| CDY65692 | Canola | nucleus | 21.13 | 35.0 |
| CDY71034 | Canola | nucleus | 31.7 | 34.29 |
| CDY07790 | Canola | nucleus | 23.4 | 34.25 |
| CDY65670 | Canola | nucleus | 22.64 | 33.52 |
| HORVU5Hr1G095320.1 | Barley | nucleus | 8.68 | 33.33 |
| HORVU4Hr1G082500.1 | Barley | nucleus | 8.68 | 33.33 |
| HORVU3Hr1G057300.1 | Barley | nucleus | 8.68 | 33.33 |
| CDY44852 | Canola | nucleus | 40.75 | 33.23 |
| CDX70228 | Canola | nucleus | 40.38 | 33.02 |
| CDY41350 | Canola | nucleus, plastid | 31.32 | 32.94 |
| Zm00001d036330_P001 | Maize | nucleus | 29.81 | 32.11 |
| HORVU1Hr1G012760.1 | Barley | nucleus | 8.3 | 31.88 |
| CDY30924 | Canola | nucleus | 20.38 | 31.76 |
| CDY11288 | Canola | nucleus | 39.25 | 31.61 |
| CDY58688 | Canola | nucleus | 10.57 | 31.46 |
| KXG20985 | Sorghum | nucleus, plastid | 32.45 | 31.27 |
| CDY58436 | Canola | nucleus | 39.62 | 30.88 |
| CDY08602 | Canola | nucleus | 39.25 | 30.77 |
| CDX68366 | Canola | nucleus | 20.38 | 30.51 |
| CDY61764 | Canola | nucleus | 38.87 | 30.29 |
| CDY00945 | Canola | nucleus | 38.49 | 30.18 |
| HORVU1Hr1G020710.1 | Barley | nucleus | 8.68 | 29.87 |
| Zm00001d004439_P001 | Maize | nucleus | 40.0 | 29.53 |
| KRG96047 | Soybean | mitochondrion | 39.25 | 28.81 |
| HORVU5Hr1G095390.1 | Barley | nucleus | 8.3 | 28.57 |
| HORVU5Hr1G095330.1 | Barley | nucleus | 8.3 | 28.57 |
| CDY30925 | Canola | nucleus | 18.11 | 28.4 |
| CDX89591 | Canola | nucleus | 22.26 | 28.37 |
| Os04t0162500-01 | Rice | vacuole | 30.19 | 27.68 |
| CDX99130 | Canola | nucleus | 20.0 | 27.6 |
| TraesCS2A01G002400.1 | Wheat | nucleus | 35.47 | 27.49 |
| Zm00001d051865_P001 | Maize | nucleus | 33.58 | 26.97 |
| Zm00001d024866_P001 | Maize | nucleus | 36.98 | 26.78 |
| CDY42128 | Canola | nucleus | 21.89 | 26.01 |
| CDX86044 | Canola | nucleus | 20.0 | 25.98 |
| Os02t0823900-00 | Rice | cytosol, nucleus, peroxisome | 33.58 | 25.87 |
| TraesCS2B01G020300.1 | Wheat | nucleus | 35.09 | 25.48 |
| EES10410 | Sorghum | nucleus | 37.74 | 24.94 |
| TraesCS6D01G387900.1 | Wheat | nucleus | 34.34 | 24.86 |
| TraesCS6B01G448900.1 | Wheat | nucleus | 33.96 | 24.66 |
| HORVU6Hr1G092750.1 | Barley | nucleus | 33.58 | 24.65 |
| TraesCS6A01G404600.1 | Wheat | nucleus | 33.96 | 24.52 |
| CDY05027 | Canola | nucleus | 14.72 | 23.35 |
| EES07783 | Sorghum | nucleus | 33.21 | 22.51 |
Protein Annotations
| EnsemblPlants:CDX70302 | EnsemblPlantsGene:GSBRNA2T00136455001 | GO:A0A078C0K2 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF318 | PFAM:PF13912 |
| PFscan:PS50157 | ProteinID:CDX70302 | ProteinID:CDX70302.1 | ScanProsite:PS00028 | SMART:SM00355 | SUPFAM:SSF57667 |
| UniParc:UPI0004EEF12E | MapMan:15.5.15 | : | : | : | : |
Description
BnaA10g26510D
Coordinates
chrLK031790:-:4028939..4029736
Molecular Weight (calculated)
28942.1 Da
IEP (calculated)
7.653
GRAVY (calculated)
-0.578
Length
265 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSVHEEMRH VLLIKGKRTK RQRSASPHMN AEAVSGVCSE ERSLEAREDG AGEIEFQGAT EEDQDMANCL MLLSQGHKAN GSGDHSSTHK LDFLSYKNPA
101: ASLGLGLEGV YQCQTCDKSF HSFQALGGHR ASHKKPKLGA IVLKCHEKKS SSAFAVETAK GSFLSLQVTS SDGNKKPEKT HECSICKAEF SSGQALGGHM
201: RRHRGLIVNA NATSSHHQES IRPKNYLELD LNLPAPEDES KFVFASKDQI ILFTTASNSL IDCHH
101: ASLGLGLEGV YQCQTCDKSF HSFQALGGHR ASHKKPKLGA IVLKCHEKKS SSAFAVETAK GSFLSLQVTS SDGNKKPEKT HECSICKAEF SSGQALGGHM
201: RRHRGLIVNA NATSSHHQES IRPKNYLELD LNLPAPEDES KFVFASKDQI ILFTTASNSL IDCHH
001: MTSVLEESGD HARLVLLIKG KRTKRQRSAS PLMMNAAAVS SVCSGERSSV EVREEEAAGE VEFQGATDED EDMANCLILL SQGHQAKSSD DHLSMQRMGF
101: FSNKKPVASL GLGLDGVYQC KTCDKSFHSF QALGGHRASH KKPKLGASVF KCVEKKTASA STVETVEAGA VGSFLSLQVT SSDGSKKPEK THECSICKAE
201: FSSGQALGGH MRRHRGLTIN ANATSAIKTA ISSSSHHHHE ESIRPKNFLQ LDLNLPAPED ERCCEKPKFA FASKDQILLF TAASNSLIDC HH
101: FSNKKPVASL GLGLDGVYQC KTCDKSFHSF QALGGHRASH KKPKLGASVF KCVEKKTASA STVETVEAGA VGSFLSLQVT SSDGSKKPEK THECSICKAE
201: FSSGQALGGH MRRHRGLTIN ANATSAIKTA ISSSSHHHHE ESIRPKNFLQ LDLNLPAPED ERCCEKPKFA FASKDQILLF TAASNSLIDC HH
Arabidopsis Description
C2H2-type zinc finger family protein [Source:UniProtKB/TrEMBL;Acc:Q9LZD5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.