Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY65692 | Canola | nucleus | 93.63 | 91.88 |
| CDX71073 | Canola | nucleus | 87.9 | 87.34 |
| CDX88724 | Canola | nucleus | 87.9 | 86.79 |
| AT5G59820.1 | Thale cress | nucleus | 87.9 | 85.19 |
| CDY31593 | Canola | nucleus | 83.44 | 81.88 |
| CDX80226 | Canola | nucleus | 83.44 | 81.37 |
| CDY30924 | Canola | nucleus | 64.33 | 59.41 |
| CDY30925 | Canola | nucleus | 57.96 | 53.85 |
| CDX68366 | Canola | nucleus | 59.87 | 53.11 |
| CDX99130 | Canola | nucleus | 61.15 | 50.0 |
| CDY58688 | Canola | nucleus | 26.75 | 47.19 |
| CDX86044 | Canola | nucleus | 61.15 | 47.06 |
| CDY04582 | Canola | nucleus | 43.95 | 46.0 |
| CDY15775 | Canola | nucleus | 43.95 | 46.0 |
| CDX77198 | Canola | nucleus | 42.68 | 45.27 |
| CDY31725 | Canola | nucleus | 42.68 | 45.27 |
| PGSC0003DMT400040144 | Potato | nucleus | 43.31 | 41.21 |
| KRH29844 | Soybean | nucleus, plastid | 37.58 | 40.97 |
| PGSC0003DMT400040143 | Potato | nucleus | 43.31 | 40.96 |
| Solyc06g075780.1.1 | Tomato | nucleus | 40.13 | 40.91 |
| Solyc11g073060.1.1 | Tomato | nucleus | 39.49 | 40.26 |
| PGSC0003DMT400040141 | Potato | nucleus | 42.68 | 39.41 |
| PGSC0003DMT400040206 | Potato | nucleus | 42.68 | 39.18 |
| PGSC0003DMT400040142 | Potato | nucleus | 40.76 | 38.79 |
| KRH24840 | Soybean | nucleus | 38.22 | 38.46 |
| PGSC0003DMT400077934 | Potato | cytosol, nucleus, plastid | 40.13 | 38.41 |
| PGSC0003DMT400040207 | Potato | nucleus | 40.13 | 38.41 |
| CDX93380 | Canola | nucleus | 42.04 | 36.87 |
| CDX91362 | Canola | nucleus | 42.04 | 36.67 |
| KRH23029 | Soybean | nucleus | 39.49 | 36.26 |
| CDY18446 | Canola | nucleus | 41.4 | 36.11 |
| CDX74961 | Canola | nucleus | 40.76 | 35.56 |
| KRH10294 | Soybean | nucleus | 38.85 | 35.47 |
| CDY07578 | Canola | nucleus | 37.58 | 35.12 |
| CDY52747 | Canola | nucleus | 37.58 | 35.12 |
| CDY30857 | Canola | nucleus | 36.94 | 34.73 |
| CDY65670 | Canola | nucleus | 38.22 | 33.52 |
| CDY07790 | Canola | nucleus | 38.22 | 33.15 |
| CDX76199 | Canola | nucleus | 35.67 | 32.18 |
| CDY11027 | Canola | nucleus | 35.67 | 24.24 |
| CDX80870 | Canola | nucleus | 36.94 | 22.83 |
| CDY11255 | Canola | nucleus | 36.31 | 22.44 |
| CDY41350 | Canola | nucleus, plastid | 35.67 | 22.22 |
| CDY10376 | Canola | nucleus | 36.31 | 21.51 |
| CDX70302 | Canola | nucleus | 36.31 | 21.51 |
| CDY04886 | Canola | nucleus | 36.31 | 21.27 |
| CDY30501 | Canola | nucleus | 33.76 | 21.2 |
| CDY70037 | Canola | nucleus | 33.76 | 21.03 |
| CDY44371 | Canola | nucleus | 35.67 | 20.9 |
| CDY71034 | Canola | nucleus | 32.48 | 20.82 |
| CDX71375 | Canola | nucleus | 33.76 | 20.78 |
| CDY04544 | Canola | nucleus | 33.76 | 20.7 |
| CDY11288 | Canola | nucleus | 36.31 | 17.33 |
| CDY58436 | Canola | nucleus | 36.31 | 16.76 |
| CDY08602 | Canola | nucleus | 35.67 | 16.57 |
| CDY00945 | Canola | nucleus | 35.67 | 16.57 |
| CDX70228 | Canola | nucleus | 33.76 | 16.36 |
| CDY44852 | Canola | nucleus | 33.76 | 16.31 |
| CDY61764 | Canola | nucleus | 34.39 | 15.88 |
| CDY05027 | Canola | nucleus | 15.29 | 14.37 |
| CDX89591 | Canola | nucleus | 18.47 | 13.94 |
| CDY42128 | Canola | nucleus | 15.92 | 11.21 |
Protein Annotations
| MapMan:15.5.15 | Gene3D:3.30.160.60 | GO:A0A078F823 | UniProt:A0A078F823 | EnsemblPlants:CDY09252 | ProteinID:CDY09252 |
| ProteinID:CDY09252.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00001506001 | InterPro:IPR013087 |
| PFAM:PF13912 | ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF318 | SMART:SM00355 |
| SUPFAM:SSF57667 | UniParc:UPI0001DE4119 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | : | : |
Description
BnaA02g06780DBnaA02g06780D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F823]
Coordinates
chrLK031993:-:931716..932189
Molecular Weight (calculated)
16982.8 Da
IEP (calculated)
10.312
GRAVY (calculated)
-0.292
Length
157 amino acids
Sequence
(BLAST)
(BLAST)
001: MVAEIKSTVE ATAANCLMLL SRVRQENGGD TKRVFTCKTC LKEFHSFQAL GGHRASHKKP NNENLSGLIK KAKTPSSHPC PICGVEFPMG QALGGHMRKH
101: RNENGGGVAL VTRALLPEPT VTTLKKTSSG KRVACLDLSL GMVENLNLKL ELGRTVY
101: RNENGGGVAL VTRALLPEPT VTTLKKTSSG KRVACLDLSL GMVENLNLKL ELGRTVY
001: MVAISEIKST VDVTAANCLM LLSRVGQENV DGGDQKRVFT CKTCLKQFHS FQALGGHRAS HKKPNNDALS SGLMKKVKTS SHPCPICGVE FPMGQALGGH
101: MRRHRNESGA AGGALVTRAL LPEPTVTTLK KSSSGKRVAC LDLSLGMVDN LNLKLELGRT VY
101: MRRHRNESGA AGGALVTRAL LPEPTVTTLK KSSSGKRVAC LDLSLGMVDN LNLKLELGRT VY
Arabidopsis Description
ZAT12Zinc finger protein ZAT12 [Source:UniProtKB/Swiss-Prot;Acc:Q42410]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.