Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020284.1-P | Field mustard | nucleus | 70.0 | 100.0 |
| CDY09252 | Canola | nucleus | 91.88 | 93.63 |
| CDX71073 | Canola | nucleus | 88.12 | 89.24 |
| CDX88724 | Canola | nucleus | 88.12 | 88.68 |
| AT5G59820.1 | Thale cress | nucleus | 86.88 | 85.8 |
| CDY31593 | Canola | nucleus | 83.12 | 83.12 |
| CDX80226 | Canola | nucleus | 83.12 | 82.61 |
| CDY30924 | Canola | nucleus | 65.0 | 61.18 |
| CDX68366 | Canola | nucleus | 61.25 | 55.37 |
| CDY30925 | Canola | nucleus | 57.5 | 54.44 |
| CDX99130 | Canola | nucleus | 63.75 | 53.12 |
| CDY58688 | Canola | nucleus | 29.38 | 52.81 |
| CDX86044 | Canola | nucleus | 63.75 | 50.0 |
| CDX77198 | Canola | nucleus | 42.5 | 45.95 |
| CDY31725 | Canola | nucleus | 42.5 | 45.95 |
| CDY15775 | Canola | nucleus | 42.5 | 45.33 |
| CDY04582 | Canola | nucleus | 42.5 | 45.33 |
| KRH29844 | Soybean | nucleus, plastid | 37.5 | 41.67 |
| PGSC0003DMT400040144 | Potato | nucleus | 42.5 | 41.21 |
| PGSC0003DMT400040143 | Potato | nucleus | 42.5 | 40.96 |
| Solyc06g075780.1.1 | Tomato | nucleus | 39.38 | 40.91 |
| Solyc11g073060.1.1 | Tomato | nucleus | 38.12 | 39.61 |
| PGSC0003DMT400040141 | Potato | nucleus | 41.25 | 38.82 |
| PGSC0003DMT400040142 | Potato | nucleus | 40.0 | 38.79 |
| PGSC0003DMT400040206 | Potato | nucleus | 41.25 | 38.6 |
| KRH24840 | Soybean | nucleus | 37.5 | 38.46 |
| PGSC0003DMT400077934 | Potato | cytosol, nucleus, plastid | 39.38 | 38.41 |
| PGSC0003DMT400040207 | Potato | nucleus | 39.38 | 38.41 |
| KRH23029 | Soybean | nucleus | 39.38 | 36.84 |
| KRH10294 | Soybean | nucleus | 38.75 | 36.05 |
| CDX93380 | Canola | nucleus | 40.0 | 35.75 |
| CDY18446 | Canola | nucleus | 40.0 | 35.56 |
| CDX91362 | Canola | nucleus | 40.0 | 35.56 |
| CDX74961 | Canola | nucleus | 38.75 | 34.44 |
| CDY52747 | Canola | nucleus | 35.62 | 33.93 |
| CDY07578 | Canola | nucleus | 35.62 | 33.93 |
| CDY30857 | Canola | nucleus | 35.0 | 33.53 |
| CDY65670 | Canola | nucleus | 36.25 | 32.4 |
| CDY07790 | Canola | nucleus | 36.25 | 32.04 |
| CDX76199 | Canola | nucleus | 33.75 | 31.03 |
| CDY11027 | Canola | nucleus | 34.38 | 23.81 |
| CDY41350 | Canola | nucleus, plastid | 35.62 | 22.62 |
| CDX80870 | Canola | nucleus | 35.62 | 22.44 |
| CDY11255 | Canola | nucleus | 35.0 | 22.05 |
| CDY71034 | Canola | nucleus | 33.12 | 21.63 |
| CDX70302 | Canola | nucleus | 35.0 | 21.13 |
| CDY10376 | Canola | nucleus | 35.0 | 21.13 |
| CDY04886 | Canola | nucleus | 35.0 | 20.9 |
| CDY30501 | Canola | nucleus | 32.5 | 20.8 |
| CDY70037 | Canola | nucleus | 32.5 | 20.63 |
| CDY44371 | Canola | nucleus | 34.38 | 20.52 |
| CDX71375 | Canola | nucleus | 32.5 | 20.39 |
| CDY04544 | Canola | nucleus | 32.5 | 20.31 |
| CDY11288 | Canola | nucleus | 36.88 | 17.93 |
| CDY58436 | Canola | nucleus | 36.88 | 17.35 |
| CDX70228 | Canola | nucleus | 34.38 | 16.98 |
| CDY44852 | Canola | nucleus | 34.38 | 16.92 |
| CDY00945 | Canola | nucleus | 35.62 | 16.86 |
| CDY08602 | Canola | nucleus | 35.62 | 16.86 |
| CDY61764 | Canola | nucleus | 35.0 | 16.47 |
| CDX89591 | Canola | nucleus | 18.12 | 13.94 |
| CDY05027 | Canola | nucleus | 14.38 | 13.77 |
| CDY42128 | Canola | nucleus | 15.62 | 11.21 |
Protein Annotations
| EnsemblPlants:CDY65692 | EnsemblPlantsGene:GSBRNA2T00048022001 | Gene3D:3.30.160.60 | GO:A0A078JK13 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF318 |
| PFAM:PF13912 | PFscan:PS50157 | ProteinID:CDY65692 | ProteinID:CDY65692.1 | ScanProsite:PS00028 | SMART:SM00355 |
| SUPFAM:SSF57667 | UniParc:UPI0004EDEBD3 | UniProt:A0A078JK13 | MapMan:15.5.15 | : | : |
Description
BnaA02g06790DBnaA02g06790D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JK13]
Coordinates
chrLK034904:-:1545..2027
Molecular Weight (calculated)
17286.1 Da
IEP (calculated)
10.070
GRAVY (calculated)
-0.347
Length
160 amino acids
Sequence
(BLAST)
(BLAST)
001: MVAVSENKST VEATAANCLM LLSRVGQENG GDYKKRVFTC KTCLKEFQSF QALGGHRASH NKPNNENLSG LIKKAKTPSS HPCPICGVEF PMGQALGGHM
101: RKHRNENGGG VTLVTRALLP EPTMTTLKKS SSGKRVACLD LSLGMVENLN LKLELGRTVY
101: RKHRNENGGG VTLVTRALLP EPTMTTLKKS SSGKRVACLD LSLGMVENLN LKLELGRTVY
001: MVAISEIKST VDVTAANCLM LLSRVGQENV DGGDQKRVFT CKTCLKQFHS FQALGGHRAS HKKPNNDALS SGLMKKVKTS SHPCPICGVE FPMGQALGGH
101: MRRHRNESGA AGGALVTRAL LPEPTVTTLK KSSSGKRVAC LDLSLGMVDN LNLKLELGRT VY
101: MRRHRNESGA AGGALVTRAL LPEPTVTTLK KSSSGKRVAC LDLSLGMVDN LNLKLELGRT VY
Arabidopsis Description
ZAT12Zinc finger protein ZAT12 [Source:UniProtKB/Swiss-Prot;Acc:Q42410]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.