Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005766.1-P | Field mustard | nucleus | 100.0 | 92.03 |
| CDX80870 | Canola | nucleus | 90.94 | 90.94 |
| CDY11027 | Canola | nucleus | 77.17 | 84.85 |
| CDY10376 | Canola | nucleus | 80.71 | 77.36 |
| CDX70302 | Canola | nucleus | 79.92 | 76.6 |
| CDY04886 | Canola | nucleus | 80.71 | 76.49 |
| CDY44371 | Canola | nucleus | 78.74 | 74.63 |
| AT5G03510.1 | Thale cress | nucleus | 79.53 | 69.18 |
| GSMUA_Achr1P03310_001 | Banana | nucleus | 25.98 | 39.52 |
| HORVU2Hr1G122100.1 | Barley | nucleus, plastid | 11.81 | 38.96 |
| VIT_08s0007g04770.t01 | Wine grape | nucleus | 41.73 | 38.41 |
| CDY15775 | Canola | nucleus | 22.44 | 38.0 |
| CDY04582 | Canola | nucleus | 22.44 | 38.0 |
| CDX74961 | Canola | nucleus | 26.38 | 37.22 |
| CDX91362 | Canola | nucleus | 26.38 | 37.22 |
| CDY31725 | Canola | nucleus | 21.65 | 37.16 |
| CDX77198 | Canola | nucleus | 21.65 | 37.16 |
| KRH67769 | Soybean | nucleus | 31.5 | 37.04 |
| CDY31593 | Canola | nucleus | 23.23 | 36.88 |
| CDX71073 | Canola | nucleus | 22.83 | 36.71 |
| CDX80226 | Canola | nucleus | 23.23 | 36.65 |
| CDX88724 | Canola | nucleus | 22.83 | 36.48 |
| CDX93380 | Canola | nucleus | 25.59 | 36.31 |
| CDY09252 | Canola | nucleus | 22.44 | 36.31 |
| CDY18446 | Canola | nucleus | 25.2 | 35.56 |
| CDY30857 | Canola | nucleus | 23.23 | 35.33 |
| CDY30501 | Canola | nucleus | 34.65 | 35.2 |
| KRH19960 | Soybean | nucleus | 39.76 | 35.07 |
| CDY65692 | Canola | nucleus | 22.05 | 35.0 |
| CDY70037 | Canola | nucleus | 34.65 | 34.92 |
| CDX71375 | Canola | nucleus | 35.04 | 34.9 |
| CDY04544 | Canola | nucleus | 35.04 | 34.77 |
| PGSC0003DMT400009871 | Potato | nucleus | 40.55 | 34.56 |
| CDX76199 | Canola | nucleus | 23.62 | 34.48 |
| CDY07790 | Canola | nucleus | 24.41 | 34.25 |
| CDY65670 | Canola | nucleus | 24.02 | 34.08 |
| KRH32562 | Soybean | nucleus | 39.76 | 33.89 |
| CDY58688 | Canola | nucleus | 11.81 | 33.71 |
| HORVU3Hr1G057300.1 | Barley | nucleus | 9.06 | 33.33 |
| CDY07578 | Canola | nucleus | 22.05 | 33.33 |
| HORVU4Hr1G082500.1 | Barley | nucleus | 9.06 | 33.33 |
| CDY52747 | Canola | nucleus | 22.05 | 33.33 |
| HORVU5Hr1G095320.1 | Barley | nucleus | 9.06 | 33.33 |
| Solyc09g008440.1.1 | Tomato | nucleus | 40.55 | 33.23 |
| CDY71034 | Canola | nucleus | 31.89 | 33.06 |
| CDY41350 | Canola | nucleus, plastid | 32.28 | 32.54 |
| CDY30924 | Canola | nucleus | 21.65 | 32.35 |
| CDY44852 | Canola | nucleus | 41.34 | 32.31 |
| CDX68366 | Canola | nucleus | 22.44 | 32.2 |
| CDX70228 | Canola | nucleus | 40.94 | 32.1 |
| HORVU1Hr1G012760.1 | Barley | nucleus | 8.66 | 31.88 |
| CDY11288 | Canola | nucleus | 40.55 | 31.31 |
| Zm00001d036330_P001 | Maize | nucleus | 30.32 | 31.3 |
| CDY58436 | Canola | nucleus | 40.94 | 30.59 |
| KXG20985 | Sorghum | nucleus, plastid | 33.07 | 30.55 |
| CDY30925 | Canola | nucleus | 20.08 | 30.18 |
| HORVU1Hr1G020710.1 | Barley | nucleus | 9.06 | 29.87 |
| CDY08602 | Canola | nucleus | 39.37 | 29.59 |
| CDY00945 | Canola | nucleus | 39.37 | 29.59 |
| CDY61764 | Canola | nucleus | 39.37 | 29.41 |
| Zm00001d004439_P001 | Maize | nucleus | 40.55 | 28.69 |
| CDX99130 | Canola | nucleus | 21.65 | 28.65 |
| HORVU5Hr1G095330.1 | Barley | nucleus | 8.66 | 28.57 |
| HORVU5Hr1G095390.1 | Barley | nucleus | 8.66 | 28.57 |
| Os04t0162500-01 | Rice | vacuole | 32.28 | 28.37 |
| TraesCS2A01G002400.1 | Wheat | nucleus | 37.8 | 28.07 |
| CDX86044 | Canola | nucleus | 22.05 | 27.45 |
| CDX89591 | Canola | nucleus | 22.05 | 26.92 |
| Zm00001d024866_P001 | Maize | nucleus | 38.58 | 26.78 |
| Zm00001d051865_P001 | Maize | nucleus | 34.65 | 26.67 |
| KRG96047 | Soybean | mitochondrion | 37.4 | 26.32 |
| TraesCS2B01G020300.1 | Wheat | nucleus | 37.4 | 26.03 |
| Os02t0823900-00 | Rice | cytosol, nucleus, peroxisome | 33.86 | 25.0 |
| EES10410 | Sorghum | nucleus | 39.37 | 24.94 |
| CDY42128 | Canola | nucleus | 21.65 | 24.66 |
| HORVU6Hr1G092750.1 | Barley | nucleus | 34.25 | 24.1 |
| TraesCS6B01G448900.1 | Wheat | nucleus | 34.25 | 23.84 |
| TraesCS6D01G387900.1 | Wheat | nucleus | 34.25 | 23.77 |
| TraesCS6A01G404600.1 | Wheat | nucleus | 34.25 | 23.71 |
| EES07783 | Sorghum | nucleus | 34.65 | 22.51 |
| CDY05027 | Canola | nucleus | 14.57 | 22.16 |
Protein Annotations
| EnsemblPlants:CDY11255 | EnsemblPlantsGene:GSBRNA2T00049282001 | Gene3D:3.30.160.60 | GO:A0A078F9Y9 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF318 |
| PFAM:PF13912 | PFscan:PS50157 | ProteinID:CDY11255 | ProteinID:CDY11255.1 | ScanProsite:PS00028 | SMART:SM00355 |
| SUPFAM:SSF57667 | UniParc:UPI0004EE2808 | UniProt:A0A078F9Y9 | MapMan:15.5.15 | : | : |
Description
BnaA03g00910DBnaA03g00910D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F9Y9]
Coordinates
chrLK032010:+:392672..393502
Molecular Weight (calculated)
27896.3 Da
IEP (calculated)
8.962
GRAVY (calculated)
-0.555
Length
254 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSVHEETRL VLLIKGKRTK RQRSVSPHMN AEAMSSVCKE ERSLEAREGV GEIEFRGATD EDQDMANCLM LLSQGHKSNT SGDPLLTQKI GFLSNKKPVA
101: SLGLGLNGVY QCKTCDKSFH SFQALGGHRT SHKKPKLGAI ILKCGEKKSA SAVKTKQEKT HECSICKAEF SSGQALGGHM RRHRGLTLNA NANSTTRTEI
201: SSSHHQESIR EKNFIELDLN LPAPEDEPKF VFASKDQILL FAAAASNSLI DCHH
101: SLGLGLNGVY QCKTCDKSFH SFQALGGHRT SHKKPKLGAI ILKCGEKKSA SAVKTKQEKT HECSICKAEF SSGQALGGHM RRHRGLTLNA NANSTTRTEI
201: SSSHHQESIR EKNFIELDLN LPAPEDEPKF VFASKDQILL FAAAASNSLI DCHH
001: MTSVLEESGD HARLVLLIKG KRTKRQRSAS PLMMNAAAVS SVCSGERSSV EVREEEAAGE VEFQGATDED EDMANCLILL SQGHQAKSSD DHLSMQRMGF
101: FSNKKPVASL GLGLDGVYQC KTCDKSFHSF QALGGHRASH KKPKLGASVF KCVEKKTASA STVETVEAGA VGSFLSLQVT SSDGSKKPEK THECSICKAE
201: FSSGQALGGH MRRHRGLTIN ANATSAIKTA ISSSSHHHHE ESIRPKNFLQ LDLNLPAPED ERCCEKPKFA FASKDQILLF TAASNSLIDC HH
101: FSNKKPVASL GLGLDGVYQC KTCDKSFHSF QALGGHRASH KKPKLGASVF KCVEKKTASA STVETVEAGA VGSFLSLQVT SSDGSKKPEK THECSICKAE
201: FSSGQALGGH MRRHRGLTIN ANATSAIKTA ISSSSHHHHE ESIRPKNFLQ LDLNLPAPED ERCCEKPKFA FASKDQILLF TAASNSLIDC HH
Arabidopsis Description
C2H2-type zinc finger family protein [Source:UniProtKB/TrEMBL;Acc:Q9LZD5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.