CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
peroxisome 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d024866_P001	Maize	nucleus	73.57	80.6
Zm00001d004439_P001	Maize	nucleus	71.82	80.22
GSMUA_Achr1P06720_001	Banana	nucleus	21.2	56.29
Os04t0162500-01	Rice	vacuole	38.65	53.63
TraesCS2A01G002400.1	Wheat	nucleus	45.64	53.51
TraesCS2B01G020300.1	Wheat	nucleus	45.64	50.14
CDY11027	Canola	nucleus	24.69	42.86
VIT_08s0007g04770.t01	Wine grape	nucleus	29.43	42.75
EER90627	Sorghum	cytosol, mitochondrion, nucleus	15.21	41.78
KRH67769	Soybean	nucleus	21.7	40.28
CDX80870	Canola	nucleus	24.94	39.37
CDY11255	Canola	nucleus	24.94	39.37
CDY10376	Canola	nucleus	25.69	38.87
CDY04886	Canola	nucleus	25.94	38.81
Bra028831.1-P	Field mustard	nucleus	25.94	38.81
VIT_13s0019g05170.t01	Wine grape	nucleus	28.68	38.08
VIT_06s0061g00760.t01	Wine grape	nucleus	27.43	38.06
CDY44371	Canola	nucleus	25.44	38.06
CDX70302	Canola	nucleus	24.94	37.74
Bra009525.1-P	Field mustard	nucleus	24.94	37.74
KRH19960	Soybean	nucleus	26.68	37.15
Bra005766.1-P	Field mustard	nucleus	25.44	36.96
AT5G03510.1	Thale cress	nucleus	25.94	35.62
KRH32562	Soybean	nucleus	26.43	35.57
PGSC0003DMT400001104	Potato	nucleus	25.69	35.4
Solyc11g066400.1.1	Tomato	nucleus, plastid	25.94	35.37
KXG20985	Sorghum	nucleus, plastid	23.94	34.91
Solyc06g074800.1.1	Tomato	nucleus	28.18	34.66
PGSC0003DMT400018457	Potato	nucleus	28.43	34.65
CDY71034	Canola	nucleus	20.95	34.29
EER92453	Sorghum	nucleus	16.71	34.01
PGSC0003DMT400009871	Potato	nucleus	25.19	33.89
Solyc09g008440.1.1	Tomato	nucleus	26.18	33.87
EER93193	Sorghum	cytosol, nucleus, plastid	12.47	33.56
KRG92135	Soybean	nucleus	27.18	33.33
CDY11288	Canola	nucleus	26.93	32.83
CDY41350	Canola	nucleus, plastid	20.2	32.14
CDX70228	Canola	nucleus	25.94	32.1
CDY58436	Canola	nucleus	27.18	32.06
CDY44852	Canola	nucleus	25.94	32.0
KRH26537	Soybean	nucleus, plastid	24.94	31.95
KRH22825	Soybean	nucleus	24.94	31.75
OQU87825	Sorghum	nucleus	14.46	31.18
KRH25111	Soybean	nucleus, plastid	24.44	31.11
EES07783	Sorghum	nucleus	30.17	30.95
CDY61764	Canola	nucleus	26.18	30.88
KXG21109	Sorghum	nucleus	15.46	30.69
KRH34655	Soybean	nucleus	27.18	30.62
KRH30555	Soybean	nucleus	23.44	30.52
CDY00945	Canola	nucleus	25.44	30.18
CDY08602	Canola	nucleus	25.44	30.18
Bra009457.1-P	Field mustard	nucleus	25.94	30.14
AT5G04390.1	Thale cress	nucleus	27.18	30.11
Bra005803.1-P	Field mustard	nucleus	26.93	30.08
EER93194	Sorghum	nucleus, plastid	13.72	30.05
Solyc05g055500.1.1	Tomato	nucleus	26.93	29.83
Bra028791.1-P	Field mustard	nucleus	26.18	29.83
Bra034116.1-P	Field mustard	plastid	20.2	29.14
KRG96047	Soybean	mitochondrion	25.94	28.81
Bra029843.1-P	Field mustard	nucleus	22.44	27.69
AT3G10470.1	Thale cress	nucleus	27.18	27.39
EES18355	Sorghum	nucleus	14.21	27.27
EES03852	Sorghum	cytosol	15.71	27.27
CDX89591	Canola	nucleus	13.97	26.92
PGSC0003DMT400079773	Potato	nucleus	24.44	26.63
EES10296	Sorghum	plastid	11.72	25.68
CDY42128	Canola	nucleus	13.72	24.66
CDY05027	Canola	nucleus	8.48	20.36
OQU84076	Sorghum	nucleus	10.97	19.21

Protein Annotations

MapMan:15.5.15	Gene3D:3.30.160.60	EntrezGene:8066003	UniProt:C5YC66	EnsemblPlants:EES10410	ProteinID:EES10410
ProteinID:EES10410.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	InterPro:IPR013087	PFAM:PF13912	ScanProsite:PS00028	PFscan:PS50157
PANTHER:PTHR26374	PANTHER:PTHR26374:SF329	SMART:SM00355	EnsemblPlantsGene:SORBI_3006G015600	SUPFAM:SSF57667	UniParc:UPI0001A86CBD
RefSeq:XP_002446082.1	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr6:+:2412517..2414067

Molecular Weight (calculated)

40372.3 Da

IEP (calculated)

6.620

GRAVY (calculated)

-0.324

Length

401 amino acids

Sequence
(BLAST)

001: MGGSGFGVQE EEAGTPPPAM VVPPVLVKGK RSKRQRVHAP PVVAAPAPEW SSSAASAATA PAGGGGEDSV VSGSGTTTTT TSPSVAADEA ASASASAGCC
101: GGLTEEDEAM ALCLMLLAHG EPATAKDTKD GGHGTTAAAV AKDKEASSRF RSRRPAAPGD GGAAASGEYV YECKTCNKCF SSFQALGGHR TSHKKPRLLL
201: PPVPPPPPSS QPPQEKDHLV LAPAPAAAEP TDAPSPPPTT PAPAPAEGTA DATVLLAIPI ATAPKQERQD AGAAVPVAIA VATSSGGGGG SKHHQHPRVH
301: ECSICGAEFG SGQALGGHMR RHRPLVPAAA RDRDRDDAHG SAKKEKSLLE LDLNMPAPCD EAETPAALTS PRFAFAAVAE RPPAPLLFPP ATPSALVDCH
401: Y

Best Arabidopsis Sequence Match ( AT2G28200.1 )
(BLAST)

001: MMMGQDEVGS DQTQIIKGKR TKRQRSSSTF VVTAATTVTS TSSSAGGSGG ERAVSDEYNS AVSSPVTTDC TQEEEDMAIC LIMLARGTVL PSPDLKNSRK
101: IHQKISSENS SFYVYECKTC NRTFSSFQAL GGHRASHKKP RTSTEEKTRL PLTQPKSSAS EEGQNSHFKV SGSALASQAS NIINKANKVH ECSICGSEFT
201: SGQALGGHMR RHRTAVTTIS PVAATAEVSR NSTEEEIEIN IGRSMEQQRK YLPLDLNLPA PEDDLRESKF QGIVFSATPA LIDCHY

Arabidopsis Description

ZAT5Zinc finger protein ZAT5 [Source:UniProtKB/Swiss-Prot;Acc:Q681X4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.