Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 4
- nucleus 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P06720_001 | Banana | nucleus | 32.53 | 62.25 |
| TraesCS2A01G002400.1 | Wheat | nucleus | 55.71 | 47.08 |
| TraesCS2B01G020300.1 | Wheat | nucleus | 54.67 | 43.29 |
| Zm00001d004439_P001 | Maize | nucleus | 52.6 | 42.34 |
| Zm00001d024866_P001 | Maize | nucleus | 53.29 | 42.08 |
| KRH67769 | Soybean | nucleus | 29.07 | 38.89 |
| EES10410 | Sorghum | nucleus | 53.63 | 38.65 |
| Os03t0820400-01 | Rice | nucleus | 18.34 | 36.81 |
| Os03t0279700-01 | Rice | nucleus | 23.18 | 35.08 |
| Os01t0839100-01 | Rice | nucleus | 19.72 | 33.33 |
| Os05t0114400-01 | Rice | nucleus | 22.84 | 33.33 |
| CDY11027 | Canola | nucleus | 25.95 | 32.47 |
| CDY11255 | Canola | nucleus | 28.37 | 32.28 |
| VIT_08s0007g04770.t01 | Wine grape | nucleus | 30.8 | 32.25 |
| CDY71034 | Canola | nucleus | 27.34 | 32.24 |
| Bra028831.1-P | Field mustard | nucleus | 29.76 | 32.09 |
| CDY04886 | Canola | nucleus | 29.76 | 32.09 |
| CDX80870 | Canola | nucleus | 28.03 | 31.89 |
| VIT_06s0061g00760.t01 | Wine grape | nucleus | 31.49 | 31.49 |
| CDY41350 | Canola | nucleus, plastid | 27.34 | 31.35 |
| CDY44371 | Canola | nucleus | 28.72 | 30.97 |
| Os03t0820300-01 | Rice | nucleus | 17.99 | 30.59 |
| PGSC0003DMT400001104 | Potato | nucleus | 30.8 | 30.58 |
| CDY10376 | Canola | nucleus | 28.03 | 30.57 |
| Os02t0823900-00 | Rice | cytosol, nucleus, peroxisome | 36.33 | 30.52 |
| Bra005766.1-P | Field mustard | nucleus | 29.07 | 30.43 |
| Solyc11g066400.1.1 | Tomato | nucleus, plastid | 30.8 | 30.27 |
| Bra009525.1-P | Field mustard | nucleus | 27.68 | 30.19 |
| CDX70302 | Canola | nucleus | 27.68 | 30.19 |
| VIT_13s0019g05170.t01 | Wine grape | nucleus | 31.49 | 30.13 |
| PGSC0003DMT400009871 | Potato | nucleus | 30.8 | 29.87 |
| Solyc09g008440.1.1 | Tomato | nucleus | 31.83 | 29.68 |
| KRH19960 | Soybean | nucleus | 29.41 | 29.51 |
| AT5G03510.1 | Thale cress | nucleus | 29.07 | 28.77 |
| KRH26537 | Soybean | nucleus, plastid | 31.14 | 28.75 |
| KRH25111 | Soybean | nucleus, plastid | 31.14 | 28.57 |
| KRH30555 | Soybean | nucleus | 30.45 | 28.57 |
| KRG92135 | Soybean | nucleus | 32.18 | 28.44 |
| Bra034116.1-P | Field mustard | plastid | 27.34 | 28.42 |
| Os05t0461200-00 | Rice | cytosol | 20.07 | 28.16 |
| Os01t0838600-00 | Rice | nucleus | 21.11 | 28.11 |
| PGSC0003DMT400018457 | Potato | nucleus | 31.83 | 27.96 |
| KRH22825 | Soybean | nucleus | 30.45 | 27.94 |
| Solyc06g074800.1.1 | Tomato | nucleus | 31.49 | 27.91 |
| KRH32562 | Soybean | nucleus | 28.72 | 27.85 |
| Os11t0702300-00 | Rice | nucleus | 15.57 | 27.61 |
| Os05t0460900-00 | Rice | cytosol | 16.61 | 27.59 |
| Bra029843.1-P | Field mustard | nucleus | 29.76 | 26.46 |
| KRH34655 | Soybean | nucleus | 31.83 | 25.84 |
| CDX70228 | Canola | nucleus | 28.72 | 25.62 |
| CDY44852 | Canola | nucleus | 28.37 | 25.23 |
| CDY00945 | Canola | nucleus | 29.41 | 25.15 |
| CDY08602 | Canola | nucleus | 29.41 | 25.15 |
| Bra009457.1-P | Field mustard | nucleus | 29.41 | 24.64 |
| CDY11288 | Canola | nucleus | 28.03 | 24.62 |
| CDY58436 | Canola | nucleus | 28.72 | 24.41 |
| Os11t0702400-01 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 14.19 | 24.12 |
| AT5G04390.1 | Thale cress | nucleus | 30.1 | 24.03 |
| CDY61764 | Canola | nucleus | 28.03 | 23.82 |
| KRG96047 | Soybean | mitochondrion | 29.41 | 23.55 |
| Solyc05g055500.1.1 | Tomato | nucleus | 29.41 | 23.48 |
| Bra028791.1-P | Field mustard | nucleus | 28.03 | 23.01 |
| Bra005803.1-P | Field mustard | nucleus | 28.03 | 22.56 |
| AT3G10470.1 | Thale cress | nucleus | 30.1 | 21.86 |
| PGSC0003DMT400079773 | Potato | nucleus | 27.68 | 21.74 |
| CDY05027 | Canola | nucleus | 12.11 | 20.96 |
| CDX89591 | Canola | nucleus | 13.84 | 19.23 |
| CDY42128 | Canola | nucleus | 12.11 | 15.7 |
Protein Annotations
| MapMan:15.5.15 | ProteinID:BAF14040.1 | ProteinID:BAS87850.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:IPR013087 | EnsemblPlantsGene:Os04g0162500 |
| EnsemblPlants:Os04t0162500-01 | PFAM:PF13912 | ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF162 |
| UniProt:Q0JF47 | SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI0000DD8F3D | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type |
| SEG:seg | : | : | : | : | : |
Description
Zinc finger, C2H2-type domain containing protein. (Os04t0162500-01)
Coordinates
chr4:+:4296220..4297568
Molecular Weight (calculated)
30171.2 Da
IEP (calculated)
8.224
GRAVY (calculated)
-0.078
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: SLAIANLFLA TLAHSTSYSL PLFLLPSWRK KADMALCLML LASGGHGERA PDAEAVAAKE AKFRSRRPAD GAGAGEFVYE CKTCSKCFPS FQALGGHRTS
101: HKKPRLVAPP AAMEPAADDK IKPTIPETAA AAAEEKPPKP SPPRPPASRP IATDPTVLAI PVIPKQEVLD ATNSAAIASV SKQPRVHECS ICGAEFASGQ
201: ALGGHMRRHR PLIPASASSA VVSVLDAVDA PRQKEKSLLE LDLNMPAPCD DATAETTTTS SAATSPAFAF AVSDRSPLLV PAALVGCHY
101: HKKPRLVAPP AAMEPAADDK IKPTIPETAA AAAEEKPPKP SPPRPPASRP IATDPTVLAI PVIPKQEVLD ATNSAAIASV SKQPRVHECS ICGAEFASGQ
201: ALGGHMRRHR PLIPASASSA VVSVLDAVDA PRQKEKSLLE LDLNMPAPCD DATAETTTTS SAATSPAFAF AVSDRSPLLV PAALVGCHY
001: MTSVLEESGD HARLVLLIKG KRTKRQRSAS PLMMNAAAVS SVCSGERSSV EVREEEAAGE VEFQGATDED EDMANCLILL SQGHQAKSSD DHLSMQRMGF
101: FSNKKPVASL GLGLDGVYQC KTCDKSFHSF QALGGHRASH KKPKLGASVF KCVEKKTASA STVETVEAGA VGSFLSLQVT SSDGSKKPEK THECSICKAE
201: FSSGQALGGH MRRHRGLTIN ANATSAIKTA ISSSSHHHHE ESIRPKNFLQ LDLNLPAPED ERCCEKPKFA FASKDQILLF TAASNSLIDC HH
101: FSNKKPVASL GLGLDGVYQC KTCDKSFHSF QALGGHRASH KKPKLGASVF KCVEKKTASA STVETVEAGA VGSFLSLQVT SSDGSKKPEK THECSICKAE
201: FSSGQALGGH MRRHRGLTIN ANATSAIKTA ISSSSHHHHE ESIRPKNFLQ LDLNLPAPED ERCCEKPKFA FASKDQILLF TAASNSLIDC HH
Arabidopsis Description
C2H2-type zinc finger family protein [Source:UniProtKB/TrEMBL;Acc:Q9LZD5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.