Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY04886 | Canola | nucleus | 99.25 | 99.25 |
| Bra009525.1-P | Field mustard | nucleus | 82.09 | 83.02 |
| Bra005766.1-P | Field mustard | nucleus | 82.46 | 80.07 |
| AT5G03510.1 | Thale cress | nucleus | 80.97 | 74.32 |
| Bra020284.1-P | Field mustard | nucleus | 18.66 | 44.64 |
| VIT_08s0007g04770.t01 | Wine grape | nucleus | 43.66 | 42.39 |
| GSMUA_Achr1P03310_001 | Banana | nucleus | 25.37 | 40.72 |
| Bra011931.1-P | Field mustard | cytosol | 22.39 | 40.0 |
| KRH67769 | Soybean | nucleus | 31.72 | 39.35 |
| Bra035678.1-P | Field mustard | nucleus | 21.64 | 39.19 |
| HORVU2Hr1G122100.1 | Barley | nucleus, plastid | 11.19 | 38.96 |
| PGSC0003DMT400009871 | Potato | nucleus | 41.79 | 37.58 |
| KRH19960 | Soybean | nucleus | 39.93 | 37.15 |
| Bra005197.1-P | Field mustard | nucleus | 23.13 | 37.13 |
| Bra006692.1-P | Field mustard | nucleus | 22.01 | 37.11 |
| Bra006691.1-P | Field mustard | nucleus | 22.01 | 37.11 |
| KRH32562 | Soybean | nucleus | 40.3 | 36.24 |
| HORVU5Hr1G095320.1 | Barley | nucleus | 9.33 | 36.23 |
| HORVU3Hr1G057300.1 | Barley | nucleus | 9.33 | 36.23 |
| HORVU4Hr1G082500.1 | Barley | nucleus | 9.33 | 36.23 |
| Solyc09g008440.1.1 | Tomato | nucleus | 41.79 | 36.13 |
| Bra017188.1-P | Field mustard | nucleus | 24.25 | 36.11 |
| Bra003148.1-P | Field mustard | nucleus | 22.01 | 35.12 |
| Bra039806.1-P | Field mustard | nucleus | 22.76 | 35.06 |
| Bra002528.1-P | Field mustard | nucleus | 20.9 | 35.0 |
| HORVU1Hr1G012760.1 | Barley | nucleus | 8.96 | 34.78 |
| Bra030981.1-P | Field mustard | nucleus | 23.13 | 34.25 |
| Bra011970.1-P | Field mustard | nucleus | 35.07 | 32.64 |
| HORVU1Hr1G020710.1 | Barley | nucleus | 9.33 | 32.47 |
| Zm00001d036330_P001 | Maize | nucleus | 29.48 | 32.11 |
| Bra034396.1-P | Field mustard | nucleus | 34.7 | 31.85 |
| Bra019477.1-P | Field mustard | nucleus | 20.15 | 31.76 |
| KXG20985 | Sorghum | nucleus, plastid | 32.46 | 31.64 |
| Bra009457.1-P | Field mustard | nucleus | 40.3 | 31.3 |
| Bra034116.1-P | Field mustard | plastid | 32.46 | 31.3 |
| HORVU5Hr1G095330.1 | Barley | nucleus | 8.96 | 31.17 |
| HORVU5Hr1G095390.1 | Barley | nucleus | 8.96 | 31.17 |
| Bra028791.1-P | Field mustard | nucleus | 39.55 | 30.11 |
| Zm00001d004439_P001 | Maize | nucleus | 39.93 | 29.8 |
| Bra005803.1-P | Field mustard | nucleus | 39.93 | 29.8 |
| Os04t0162500-01 | Rice | vacuole | 32.09 | 29.76 |
| Bra019476.1-P | Field mustard | nucleus | 18.66 | 29.59 |
| TraesCS2A01G002400.1 | Wheat | nucleus | 36.94 | 28.95 |
| Bra018225.1-P | Field mustard | nucleus | 20.52 | 28.65 |
| Bra029843.1-P | Field mustard | nucleus | 34.7 | 28.62 |
| Zm00001d024866_P001 | Maize | nucleus | 38.43 | 28.14 |
| Zm00001d051865_P001 | Maize | nucleus | 34.33 | 27.88 |
| KRG96047 | Soybean | mitochondrion | 36.94 | 27.42 |
| Os02t0823900-00 | Rice | cytosol, nucleus, peroxisome | 35.07 | 27.33 |
| TraesCS2B01G020300.1 | Wheat | nucleus | 36.19 | 26.58 |
| EES10410 | Sorghum | nucleus | 38.81 | 25.94 |
| HORVU6Hr1G092750.1 | Barley | nucleus | 34.7 | 25.76 |
| TraesCS6B01G448900.1 | Wheat | nucleus | 34.7 | 25.48 |
| TraesCS6D01G387900.1 | Wheat | nucleus | 34.7 | 25.41 |
| TraesCS6A01G404600.1 | Wheat | nucleus | 34.7 | 25.34 |
| EES07783 | Sorghum | nucleus | 34.7 | 23.79 |
Protein Annotations
| EnsemblPlants:Bra028831.1 | EnsemblPlants:Bra028831.1-P | EnsemblPlantsGene:Bra028831 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF318 |
| PFAM:PF13912 | PFscan:PS50157 | ScanProsite:PS00028 | SEG:seg | SMART:SM00355 | SUPFAM:SSF57667 |
| UniParc:UPI0002543026 | UniProt:M4EJ65 | MapMan:15.5.15 | : | : | : |
Description
AT5G03510 (E=9e-108) | zinc finger (C2H2 type) family protein
Coordinates
chrA02:+:1842245..1843051
Molecular Weight (calculated)
29092.2 Da
IEP (calculated)
7.399
GRAVY (calculated)
-0.588
Length
268 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSFHEETRL VLLTKGKRTK RPRSSSPHMN AEAVSGVCSE DRSLEAKEGA GEVEFQGATD EDQDMANCLM LLSQGHKEKS SGDHSSTLKI GFLTDKKPVA
101: SLGLGLDGVY QCKTCDKSFH SFQALGGHRA SHKKPKRDEK NSASAVETVE SAEAVGSFLS LQVTSSDGSK KPEKTHECSI CKAEFSSGQA LGGHMRRHRG
201: LNVNANATSI TKAVLSSSHH QEPIRPKNFL ELDLNLPAPE DEPKFVFASK DQMLLFVSAS NSLIDCHH
101: SLGLGLDGVY QCKTCDKSFH SFQALGGHRA SHKKPKRDEK NSASAVETVE SAEAVGSFLS LQVTSSDGSK KPEKTHECSI CKAEFSSGQA LGGHMRRHRG
201: LNVNANATSI TKAVLSSSHH QEPIRPKNFL ELDLNLPAPE DEPKFVFASK DQMLLFVSAS NSLIDCHH
001: MTSVLEESGD HARLVLLIKG KRTKRQRSAS PLMMNAAAVS SVCSGERSSV EVREEEAAGE VEFQGATDED EDMANCLILL SQGHQAKSSD DHLSMQRMGF
101: FSNKKPVASL GLGLDGVYQC KTCDKSFHSF QALGGHRASH KKPKLGASVF KCVEKKTASA STVETVEAGA VGSFLSLQVT SSDGSKKPEK THECSICKAE
201: FSSGQALGGH MRRHRGLTIN ANATSAIKTA ISSSSHHHHE ESIRPKNFLQ LDLNLPAPED ERCCEKPKFA FASKDQILLF TAASNSLIDC HH
101: FSNKKPVASL GLGLDGVYQC KTCDKSFHSF QALGGHRASH KKPKLGASVF KCVEKKTASA STVETVEAGA VGSFLSLQVT SSDGSKKPEK THECSICKAE
201: FSSGQALGGH MRRHRGLTIN ANATSAIKTA ISSSSHHHHE ESIRPKNFLQ LDLNLPAPED ERCCEKPKFA FASKDQILLF TAASNSLIDC HH
Arabidopsis Description
C2H2-type zinc finger family protein [Source:UniProtKB/TrEMBL;Acc:Q9LZD5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.