Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
- plastid 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY31593 | Canola | nucleus | 98.75 | 98.75 |
AT5G59820.1 | Thale cress | nucleus | 85.0 | 83.95 |
Bra006691.1-P | Field mustard | nucleus | 83.12 | 83.65 |
Bra006692.1-P | Field mustard | nucleus | 83.12 | 83.65 |
Bra020284.1-P | Field mustard | nucleus | 58.12 | 83.04 |
Bra019477.1-P | Field mustard | nucleus | 65.0 | 61.18 |
Bra018225.1-P | Field mustard | nucleus | 61.25 | 51.04 |
Bra019476.1-P | Field mustard | nucleus | 53.12 | 50.3 |
Bra035678.1-P | Field mustard | nucleus | 39.38 | 42.57 |
Bra011931.1-P | Field mustard | cytosol | 39.38 | 42.0 |
KRH29844 | Soybean | nucleus, plastid | 36.88 | 40.97 |
Solyc06g075780.1.1 | Tomato | nucleus | 38.75 | 40.26 |
PGSC0003DMT400040144 | Potato | nucleus | 41.25 | 40.0 |
PGSC0003DMT400040143 | Potato | nucleus | 41.25 | 39.76 |
KRH24840 | Soybean | nucleus | 37.5 | 38.46 |
Solyc11g073060.1.1 | Tomato | nucleus | 36.88 | 38.31 |
PGSC0003DMT400040141 | Potato | nucleus | 40.62 | 38.24 |
PGSC0003DMT400040206 | Potato | nucleus | 40.62 | 38.01 |
PGSC0003DMT400040142 | Potato | nucleus | 38.75 | 37.58 |
KRH23029 | Soybean | nucleus | 40.0 | 37.43 |
PGSC0003DMT400077934 | Potato | cytosol, nucleus, plastid | 38.12 | 37.2 |
KRH10294 | Soybean | nucleus | 39.38 | 36.63 |
PGSC0003DMT400040207 | Potato | nucleus | 37.5 | 36.59 |
Bra017188.1-P | Field mustard | nucleus | 40.0 | 35.56 |
Bra005197.1-P | Field mustard | nucleus | 36.88 | 35.33 |
Bra003148.1-P | Field mustard | nucleus | 35.0 | 33.33 |
Bra030981.1-P | Field mustard | nucleus | 36.88 | 32.6 |
Bra039806.1-P | Field mustard | nucleus | 33.75 | 31.03 |
Bra009525.1-P | Field mustard | nucleus | 35.0 | 21.13 |
Bra005766.1-P | Field mustard | nucleus | 36.25 | 21.01 |
Bra028831.1-P | Field mustard | nucleus | 35.0 | 20.9 |
Bra034116.1-P | Field mustard | plastid | 35.62 | 20.5 |
Bra011970.1-P | Field mustard | nucleus | 35.62 | 19.79 |
Bra034396.1-P | Field mustard | nucleus | 33.75 | 18.49 |
Bra029843.1-P | Field mustard | nucleus | 35.62 | 17.54 |
Bra028791.1-P | Field mustard | nucleus | 35.62 | 16.19 |
Bra005803.1-P | Field mustard | nucleus | 36.25 | 16.16 |
Bra009457.1-P | Field mustard | nucleus | 33.75 | 15.65 |
Protein Annotations
EnsemblPlants:Bra002528.1 | EnsemblPlants:Bra002528.1-P | EnsemblPlantsGene:Bra002528 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 |
GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF318 |
PFAM:PF13912 | PFscan:PS50157 | ScanProsite:PS00028 | SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI0002543D00 |
UniProt:M4CE97 | MapMan:15.5.15 | : | : | : | : |
Description
AT5G59820 (E=5e-070) RHL41, ZAT12 | RHL41 (RESPONSIVE TO HIGH LIGHT 41); nucleic acid binding / transcription factor/ zinc ion binding
Coordinates
chrA10:+:9046551..9047033
Molecular Weight (calculated)
17143.9 Da
IEP (calculated)
9.560
GRAVY (calculated)
-0.172
Length
160 amino acids
Sequence
(BLAST)
(BLAST)
001: MVAISEIKST VETTAANCLM LLSRVGQENV DGGSAKRVFT CKTCLKEFLS FQAWGGHRAS HKKPNNENLS SLMKKTKASS SHPCPICGVE FPMGQALGGH
101: MRRHRNESGG AGALVTRELL SEAALTTLKK SSSGRLACLD LSLGMVENLN LKLELGRPVC
101: MRRHRNESGG AGALVTRELL SEAALTTLKK SSSGRLACLD LSLGMVENLN LKLELGRPVC
001: MVAISEIKST VDVTAANCLM LLSRVGQENV DGGDQKRVFT CKTCLKQFHS FQALGGHRAS HKKPNNDALS SGLMKKVKTS SHPCPICGVE FPMGQALGGH
101: MRRHRNESGA AGGALVTRAL LPEPTVTTLK KSSSGKRVAC LDLSLGMVDN LNLKLELGRT VY
101: MRRHRNESGA AGGALVTRAL LPEPTVTTLK KSSSGKRVAC LDLSLGMVDN LNLKLELGRT VY
Arabidopsis Description
ZAT12Zinc finger protein ZAT12 [Source:UniProtKB/Swiss-Prot;Acc:Q42410]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.