Factsheet for Bra017188.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18446	Canola	nucleus	100.0	100.0
Bra030981.1-P	Field mustard	nucleus	82.78	82.32
Bra005197.1-P	Field mustard	nucleus	75.56	81.44
AT2G37430.1	Thale cress	nucleus	80.0	80.9
Bra003148.1-P	Field mustard	nucleus	49.44	52.98
KRH19739	Soybean	cytosol, nucleus	45.0	50.94
KRG95848	Soybean	nucleus	48.33	50.88
KRH32333	Soybean	nucleus	46.11	50.61
KRH67564	Soybean	nucleus	48.33	50.29
Bra039806.1-P	Field mustard	nucleus	47.22	48.85
KRH32335	Soybean	nucleus	46.67	46.93
KRH67565	Soybean	cytosol, nucleus, plastid	40.56	45.91
KRH19742	Soybean	nucleus	46.11	45.6
KRH67566	Soybean	nucleus	38.89	44.3
Bra011931.1-P	Field mustard	cytosol	36.67	44.0
Bra035678.1-P	Field mustard	nucleus	35.56	43.24
KRG95850	Soybean	nucleus	37.22	43.23
Bra006691.1-P	Field mustard	nucleus	36.67	41.51
Bra006692.1-P	Field mustard	nucleus	36.67	41.51
Bra020284.1-P	Field mustard	nucleus	25.56	41.07
KRH19741	Soybean	nucleus	40.0	40.91
Bra002528.1-P	Field mustard	nucleus	35.56	40.0
Bra019477.1-P	Field mustard	nucleus	37.22	39.41
KRH32334	Soybean	nucleus	38.89	38.67
GSMUA_Achr6P34280_001	Banana	cytosol, mitochondrion, nucleus	22.22	36.36
GSMUA_Achr8P02630_001	Banana	nucleus	20.0	36.0
Bra019476.1-P	Field mustard	nucleus	33.33	35.5
Bra018225.1-P	Field mustard	nucleus	35.56	33.33
Bra009525.1-P	Field mustard	nucleus	36.67	24.91
Bra028831.1-P	Field mustard	nucleus	36.11	24.25
Bra011970.1-P	Field mustard	nucleus	37.22	23.26
Bra005766.1-P	Field mustard	nucleus	35.56	23.19
Bra034396.1-P	Field mustard	nucleus	35.56	21.92
Bra034116.1-P	Field mustard	plastid	33.33	21.58
Bra009457.1-P	Field mustard	nucleus	35.56	18.55
Bra029843.1-P	Field mustard	nucleus	33.33	18.46
Bra005803.1-P	Field mustard	nucleus	36.11	18.11
Bra028791.1-P	Field mustard	nucleus	35.0	17.9

Protein Annotations

EnsemblPlants:Bra017188.1	EnsemblPlants:Bra017188.1-P	EnsemblPlantsGene:Bra017188	Gene3D:3.30.160.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0005488	InterPro:IPR013087	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	PANTHER:PTHR26374	PANTHER:PTHR26374:SF198
PFAM:PF13912	PFscan:PS50157	ScanProsite:PS00028	SMART:SM00355	SUPFAM:SSF57667	UniParc:UPI0002544606
UniProt:M4DL07	MapMan:15.5.15	:	:	:	:

Description

AT2G37430 (E=2e-077) | zinc finger (C2H2 type) family protein (ZAT11)

Coordinates

chrA04:+:16121469..16122011

Molecular Weight (calculated)

20390.8 Da

IEP (calculated)

9.841

GRAVY (calculated)

-0.442

Length

180 amino acids

Sequence
(BLAST)

001: MMKRERSEFE ESIKNLDISK CLMILSQTSS MVKQIGVNQY TETNTSNRFE CKTCNKRFSS FQALGGHRAS HKKPKLTVDQ KVVKQYLTKD GTQAHECTIC
101: GQSFGTGQAL GGHMRRHRSS MTVEPSELIS PVIHNMPVLK RCSSSKRVLS LDLNLTPLEN DLEILFGKTF FPNIDMKFVV

Best Arabidopsis Sequence Match ( AT2G37430.1 )
(BLAST)

001: MKRERSDFEE SLKNIDIAKC LMILAQTSMV KQIGLNQHTE SHTSNQFECK TCNKRFSSFQ ALGGHRASHK KPKLTVEQKD VKHLSNDYKG NHFHKCSICS
101: QSFGTGQALG GHMRRHRSSM TVEPSFISPM IPSMPVLKRC GSSKRILSLD LNLTPLENDL EYIFGKTFVP KIDMKFVL

Arabidopsis Description

ZAT11ZAT11 [Source:UniProtKB/TrEMBL;Acc:A0A178VNJ8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.