Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH32334 | Soybean | nucleus | 86.36 | 83.98 |
| KRG95848 | Soybean | nucleus | 46.59 | 47.95 |
| Bra039806.1-P | Field mustard | nucleus | 47.16 | 47.7 |
| CDX76199 | Canola | nucleus | 47.16 | 47.7 |
| CDY30857 | Canola | nucleus | 44.89 | 47.31 |
| KRH32333 | Soybean | nucleus | 43.75 | 46.95 |
| KRH19739 | Soybean | cytosol, nucleus | 42.05 | 46.54 |
| Bra003148.1-P | Field mustard | nucleus | 44.32 | 46.43 |
| CDY52747 | Canola | nucleus | 44.32 | 46.43 |
| AT3G53600.1 | Thale cress | nucleus | 46.02 | 46.29 |
| KRH67564 | Soybean | nucleus | 45.45 | 46.24 |
| KRH67565 | Soybean | cytosol, nucleus, plastid | 41.48 | 45.91 |
| CDY07578 | Canola | nucleus | 43.75 | 45.83 |
| KRH32335 | Soybean | nucleus | 46.59 | 45.81 |
| KRH19742 | Soybean | nucleus | 47.16 | 45.6 |
| KRH29844 | Soybean | nucleus, plastid | 35.8 | 43.75 |
| KRG95850 | Soybean | nucleus | 36.93 | 41.94 |
| KRH67566 | Soybean | nucleus | 37.5 | 41.77 |
| KRH01600 | Soybean | cytosol, extracellular, nucleus | 40.91 | 41.14 |
| CDX91362 | Canola | nucleus | 42.05 | 41.11 |
| Bra005197.1-P | Field mustard | nucleus | 38.64 | 40.72 |
| KRG90559 | Soybean | nucleus | 39.77 | 40.46 |
| KRH24840 | Soybean | nucleus | 35.8 | 40.38 |
| CDY65670 | Canola | nucleus | 40.91 | 40.22 |
| KRH70509 | Soybean | nucleus | 40.91 | 40.0 |
| Bra017188.1-P | Field mustard | nucleus | 40.91 | 40.0 |
| CDX74961 | Canola | nucleus | 40.91 | 40.0 |
| CDY18446 | Canola | nucleus | 40.91 | 40.0 |
| AT2G37430.1 | Thale cress | nucleus | 39.77 | 39.33 |
| Bra030981.1-P | Field mustard | nucleus | 40.34 | 39.23 |
| CDY07790 | Canola | nucleus | 40.34 | 39.23 |
| CDX93380 | Canola | nucleus | 39.77 | 39.11 |
| KRH10294 | Soybean | nucleus | 38.07 | 38.95 |
| KRH23029 | Soybean | nucleus | 36.36 | 37.43 |
| KRH36195 | Soybean | extracellular | 39.2 | 37.3 |
| GSMUA_Achr8P02630_001 | Banana | nucleus | 18.18 | 32.0 |
| GSMUA_Achr6P34280_001 | Banana | cytosol, mitochondrion, nucleus | 19.89 | 31.82 |
| KRH67769 | Soybean | nucleus | 31.82 | 25.93 |
| KRH19960 | Soybean | nucleus | 35.23 | 21.53 |
| KRH32562 | Soybean | nucleus | 35.23 | 20.81 |
| KRH22825 | Soybean | nucleus | 35.8 | 20.0 |
| KRG92135 | Soybean | nucleus | 36.93 | 19.88 |
| KRH26537 | Soybean | nucleus, plastid | 35.23 | 19.81 |
| KRH30555 | Soybean | nucleus | 32.95 | 18.83 |
| KRH34655 | Soybean | nucleus | 37.5 | 18.54 |
| KRH25111 | Soybean | nucleus, plastid | 32.95 | 18.41 |
| KRG96047 | Soybean | mitochondrion | 34.09 | 16.62 |
Protein Annotations
| EntrezGene:100793782 | MapMan:15.5.15 | Gene3D:3.30.160.60 | EMBL:ACUP02008197 | EnsemblPlantsGene:GLYMA_13G133000 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| UniProt:I1LYW1 | InterPro:IPR013087 | EnsemblPlants:KRH19741 | ProteinID:KRH19741 | ProteinID:KRH19741.1 | PFAM:PF13912 |
| ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF198 | SMART:SM00355 | SUPFAM:SSF57667 |
| UniParc:UPI000233CC03 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | : | : | : |
Description
hypothetical protein
Coordinates
chr13:-:24534355..24534885
Molecular Weight (calculated)
19756.7 Da
IEP (calculated)
9.403
GRAVY (calculated)
-0.513
Length
176 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRQRENEVT TLESWDMQIC STSITPDTSV SSSTISPEDV FECKTCNRKF NSFQALGGHR ACHNKRVKME GEEQQLKTRA KYLGLGKHSE PKMHNCSICG
101: QGFSLGQALG GHMRRHRAST NDVFSSINQV VAKVSVLKRS CNDKVFYLDL NLTPLENDLK LLLFGKLSPK VNLSSF
101: QGFSLGQALG GHMRRHRAST NDVFSSINQV VAKVSVLKRS CNDKVFYLDL NLTPLENDLK LLLFGKLSPK VNLSSF
001: MKRDRSDYEE SMKHIDIVES LMMLSRSFVV KQIDVKQSTG SKTNHNNHFE CKTCNRKFDS FQALGGHRAS HKKPKLIVDQ EQVKHRNKEN DMHKCTICDQ
101: MFGTGQALGG HMRKHRTSMI TEQSIVPSVV YSRPVFNRCS SSKEILDLNL TPLENDLVLI FGKNLVPQID LKFVN
101: MFGTGQALGG HMRKHRTSMI TEQSIVPSVV YSRPVFNRCS SSKEILDLNL TPLENDLVLI FGKNLVPQID LKFVN
Arabidopsis Description
At3g53600 [Source:UniProtKB/TrEMBL;Acc:Q9LFG0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.