Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH32335 | Soybean | nucleus | 89.01 | 90.5 |
| KRG95848 | Soybean | nucleus | 63.19 | 67.25 |
| KRH67564 | Soybean | nucleus | 63.74 | 67.05 |
| KRH19739 | Soybean | cytosol, nucleus | 57.14 | 65.41 |
| KRH32333 | Soybean | nucleus | 58.79 | 65.24 |
| KRG95850 | Soybean | nucleus | 55.49 | 65.16 |
| KRH67566 | Soybean | nucleus | 56.04 | 64.56 |
| KRH67565 | Soybean | cytosol, nucleus, plastid | 48.35 | 55.35 |
| CDX91362 | Canola | nucleus | 47.8 | 48.33 |
| CDY30857 | Canola | nucleus | 43.96 | 47.9 |
| CDY07578 | Canola | nucleus | 43.96 | 47.62 |
| Bra003148.1-P | Field mustard | nucleus | 43.96 | 47.62 |
| CDY52747 | Canola | nucleus | 43.96 | 47.62 |
| CDX93380 | Canola | nucleus | 46.7 | 47.49 |
| Bra005197.1-P | Field mustard | nucleus | 43.41 | 47.31 |
| KRH19741 | Soybean | nucleus | 45.6 | 47.16 |
| CDY65670 | Canola | nucleus | 46.15 | 46.93 |
| AT3G53600.1 | Thale cress | nucleus | 45.05 | 46.86 |
| CDX74961 | Canola | nucleus | 46.15 | 46.67 |
| KRH29844 | Soybean | nucleus, plastid | 36.81 | 46.53 |
| KRH01600 | Soybean | cytosol, extracellular, nucleus | 44.51 | 46.29 |
| CDY18446 | Canola | nucleus | 45.6 | 46.11 |
| Bra017188.1-P | Field mustard | nucleus | 45.6 | 46.11 |
| CDY07790 | Canola | nucleus | 45.6 | 45.86 |
| Bra030981.1-P | Field mustard | nucleus | 45.6 | 45.86 |
| CDX76199 | Canola | nucleus | 43.41 | 45.4 |
| Bra039806.1-P | Field mustard | nucleus | 43.41 | 45.4 |
| KRH10294 | Soybean | nucleus | 42.86 | 45.35 |
| KRH70509 | Soybean | nucleus | 44.51 | 45.0 |
| KRG90559 | Soybean | nucleus | 42.31 | 44.51 |
| KRH23029 | Soybean | nucleus | 41.76 | 44.44 |
| AT2G37430.1 | Thale cress | nucleus | 43.41 | 44.38 |
| KRH24840 | Soybean | nucleus | 37.91 | 44.23 |
| KRH32334 | Soybean | nucleus | 43.96 | 44.2 |
| GSMUA_Achr8P02630_001 | Banana | nucleus | 23.08 | 42.0 |
| KRH36195 | Soybean | extracellular | 42.31 | 41.62 |
| GSMUA_Achr6P34280_001 | Banana | cytosol, mitochondrion, nucleus | 24.73 | 40.91 |
| KRH67769 | Soybean | nucleus | 34.62 | 29.17 |
| KRH19960 | Soybean | nucleus | 39.01 | 24.65 |
| KRH22825 | Soybean | nucleus | 42.31 | 24.44 |
| KRH26537 | Soybean | nucleus, plastid | 41.76 | 24.28 |
| KRH32562 | Soybean | nucleus | 39.01 | 23.83 |
| KRH30555 | Soybean | nucleus | 39.01 | 23.05 |
| KRH25111 | Soybean | nucleus, plastid | 38.46 | 22.22 |
| KRG92135 | Soybean | nucleus | 39.56 | 22.02 |
| KRH34655 | Soybean | nucleus | 39.56 | 20.22 |
| KRG96047 | Soybean | mitochondrion | 38.46 | 19.39 |
Protein Annotations
| MapMan:15.5.15 | Gene3D:3.30.160.60 | EMBL:ACUP02008197 | EnsemblPlantsGene:GLYMA_13G133100 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | UniProt:I1LYW2 |
| InterPro:IPR013087 | EnsemblPlants:KRH19742 | ProteinID:KRH19742 | ProteinID:KRH19742.1 | PFAM:PF13912 | ScanProsite:PS00028 |
| PFscan:PS50157 | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF198 | SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI00023CEE7C |
| InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr13:-:24536585..24537523
Molecular Weight (calculated)
20443.0 Da
IEP (calculated)
10.298
GRAVY (calculated)
-0.598
Length
182 amino acids
Sequence
(BLAST)
(BLAST)
001: MVAILKRQRE TEAEESIIRL AESLMQLSRV QQKSKPLLKT FSPTEFECKT CNRKFPSFQA LGGHRASHKK PKFEGEELKE EAKKGLSLGN KPKMHECSIC
101: GMEFSLGQAL GGHMRKHRGA TSENNNEAFS SSIKQAISKV PVLKRSNSKR VMCLEMDLNL TPLENDLKLL FGNKAPRVDL SL
101: GMEFSLGQAL GGHMRKHRGA TSENNNEAFS SSIKQAISKV PVLKRSNSKR VMCLEMDLNL TPLENDLKLL FGNKAPRVDL SL
001: MKRDRSDYEE SMKHIDIVES LMMLSRSFVV KQIDVKQSTG SKTNHNNHFE CKTCNRKFDS FQALGGHRAS HKKPKLIVDQ EQVKHRNKEN DMHKCTICDQ
101: MFGTGQALGG HMRKHRTSMI TEQSIVPSVV YSRPVFNRCS SSKEILDLNL TPLENDLVLI FGKNLVPQID LKFVN
101: MFGTGQALGG HMRKHRTSMI TEQSIVPSVV YSRPVFNRCS SSKEILDLNL TPLENDLVLI FGKNLVPQID LKFVN
Arabidopsis Description
At3g53600 [Source:UniProtKB/TrEMBL;Acc:Q9LFG0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.