Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY18446 | Canola | nucleus | 96.09 | 95.56 |
| CDX91362 | Canola | nucleus | 83.8 | 83.33 |
| CDY65670 | Canola | nucleus | 81.56 | 81.56 |
| CDX74961 | Canola | nucleus | 81.56 | 81.11 |
| CDY07790 | Canola | nucleus | 81.01 | 80.11 |
| AT2G37430.1 | Thale cress | nucleus | 78.77 | 79.21 |
| CDY52747 | Canola | nucleus | 48.6 | 51.79 |
| CDY07578 | Canola | nucleus | 48.6 | 51.79 |
| KRH19739 | Soybean | cytosol, nucleus | 45.25 | 50.94 |
| KRH32333 | Soybean | nucleus | 46.37 | 50.61 |
| KRG95848 | Soybean | nucleus | 48.04 | 50.29 |
| KRH67564 | Soybean | nucleus | 48.04 | 49.71 |
| CDY30857 | Canola | nucleus | 46.37 | 49.7 |
| KRH32335 | Soybean | nucleus | 48.04 | 48.04 |
| CDX76199 | Canola | nucleus | 46.37 | 47.7 |
| KRH19742 | Soybean | nucleus | 47.49 | 46.7 |
| KRH67565 | Soybean | cytosol, nucleus, plastid | 40.22 | 45.28 |
| KRH67566 | Soybean | nucleus | 39.66 | 44.94 |
| CDY04582 | Canola | nucleus | 37.43 | 44.67 |
| CDY15775 | Canola | nucleus | 37.43 | 44.67 |
| CDY31725 | Canola | nucleus | 36.31 | 43.92 |
| CDX77198 | Canola | nucleus | 36.31 | 43.92 |
| KRG95850 | Soybean | nucleus | 37.99 | 43.87 |
| CDX71073 | Canola | nucleus | 37.43 | 42.41 |
| CDY09252 | Canola | nucleus | 36.87 | 42.04 |
| CDX88724 | Canola | nucleus | 36.87 | 41.51 |
| CDY31593 | Canola | nucleus | 36.31 | 40.62 |
| CDY65692 | Canola | nucleus | 35.75 | 40.0 |
| KRH19741 | Soybean | nucleus | 39.11 | 39.77 |
| CDX80226 | Canola | nucleus | 35.75 | 39.75 |
| CDY30924 | Canola | nucleus | 36.87 | 38.82 |
| KRH32334 | Soybean | nucleus | 37.99 | 37.57 |
| GSMUA_Achr6P34280_001 | Banana | cytosol, mitochondrion, nucleus | 22.91 | 37.27 |
| GSMUA_Achr8P02630_001 | Banana | nucleus | 20.67 | 37.0 |
| CDX68366 | Canola | nucleus | 36.31 | 36.72 |
| CDY58688 | Canola | nucleus | 17.32 | 34.83 |
| CDY30925 | Canola | nucleus | 32.4 | 34.32 |
| CDX99130 | Canola | nucleus | 36.31 | 33.85 |
| CDX86044 | Canola | nucleus | 36.31 | 31.86 |
| CDY11027 | Canola | nucleus | 36.87 | 28.57 |
| CDY04544 | Canola | nucleus | 37.99 | 26.56 |
| CDY30501 | Canola | nucleus | 36.87 | 26.4 |
| CDX71375 | Canola | nucleus | 37.43 | 26.27 |
| CDY70037 | Canola | nucleus | 36.87 | 26.19 |
| CDY11255 | Canola | nucleus | 36.31 | 25.59 |
| CDY71034 | Canola | nucleus | 34.64 | 25.31 |
| CDX80870 | Canola | nucleus | 35.75 | 25.2 |
| CDY10376 | Canola | nucleus | 36.87 | 24.91 |
| CDX70302 | Canola | nucleus | 36.31 | 24.53 |
| CDY04886 | Canola | nucleus | 36.31 | 24.25 |
| CDY41350 | Canola | nucleus, plastid | 34.08 | 24.21 |
| CDY44371 | Canola | nucleus | 35.75 | 23.88 |
| CDY11288 | Canola | nucleus | 37.43 | 20.36 |
| CDX70228 | Canola | nucleus | 36.31 | 20.06 |
| CDY44852 | Canola | nucleus | 35.75 | 19.69 |
| CDY58436 | Canola | nucleus | 36.87 | 19.41 |
| CDY61764 | Canola | nucleus | 36.31 | 19.12 |
| CDY08602 | Canola | nucleus | 35.75 | 18.93 |
| CDY00945 | Canola | nucleus | 35.2 | 18.64 |
| CDX89591 | Canola | nucleus | 20.67 | 17.79 |
| CDY05027 | Canola | nucleus | 16.2 | 17.37 |
| CDY42128 | Canola | nucleus | 18.99 | 15.25 |
Protein Annotations
| EnsemblPlants:CDX93380 | EnsemblPlantsGene:GSBRNA2T00155366001 | Gene3D:3.30.160.60 | GO:A0A078DVJ4 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF198 |
| PFAM:PF13912 | PFscan:PS50157 | ProteinID:CDX93380 | ProteinID:CDX93380.1 | ScanProsite:PS00028 | SMART:SM00355 |
| SUPFAM:SSF57667 | UniParc:UPI0004EF4D1D | MapMan:15.5.15 | : | : | : |
Description
BnaC04g45160D
Coordinates
chrLK031875:-:1439517..1440056
Molecular Weight (calculated)
20229.7 Da
IEP (calculated)
9.997
GRAVY (calculated)
-0.415
Length
179 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRERSEFEE SIKNLDIAKC LMILSQTSSM VKQIGVNQYA ESNSSNRFEC KTCNKRFSSF QALGGHRASH KKPKLTVDQK VVKQYLTKEG TQAHECTICG
101: KSFGTGQALG GHMRRHRSSM MVEPSELISP VIHNMPVLKR CSSSKRVLSL DLNLTPLEND LEILFGKTFF PNIDMKFVV
101: KSFGTGQALG GHMRRHRSSM MVEPSELISP VIHNMPVLKR CSSSKRVLSL DLNLTPLEND LEILFGKTFF PNIDMKFVV
001: MKRERSDFEE SLKNIDIAKC LMILAQTSMV KQIGLNQHTE SHTSNQFECK TCNKRFSSFQ ALGGHRASHK KPKLTVEQKD VKHLSNDYKG NHFHKCSICS
101: QSFGTGQALG GHMRRHRSSM TVEPSFISPM IPSMPVLKRC GSSKRILSLD LNLTPLENDL EYIFGKTFVP KIDMKFVL
101: QSFGTGQALG GHMRRHRSSM TVEPSFISPM IPSMPVLKRC GSSKRILSLD LNLTPLENDL EYIFGKTFVP KIDMKFVL
Arabidopsis Description
ZAT11ZAT11 [Source:UniProtKB/TrEMBL;Acc:A0A178VNJ8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.