Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX71375 | Canola | nucleus | 95.7 | 96.08 |
| Bra011970.1-P | Field mustard | nucleus | 99.61 | 88.54 |
| CDY30501 | Canola | nucleus | 78.12 | 80.0 |
| CDY70037 | Canola | nucleus | 78.52 | 79.76 |
| AT2G28200.1 | Thale cress | nucleus | 78.52 | 70.28 |
| CDY30857 | Canola | nucleus | 26.17 | 40.12 |
| CDY31725 | Canola | nucleus | 23.05 | 39.86 |
| CDX77198 | Canola | nucleus | 23.05 | 39.86 |
| CDY11027 | Canola | nucleus | 35.55 | 39.39 |
| CDY15775 | Canola | nucleus | 23.05 | 39.33 |
| CDY04582 | Canola | nucleus | 22.66 | 38.67 |
| CDX76199 | Canola | nucleus | 26.17 | 38.51 |
| CDX93380 | Canola | nucleus | 26.56 | 37.99 |
| CDX74961 | Canola | nucleus | 26.56 | 37.78 |
| CDX91362 | Canola | nucleus | 26.56 | 37.78 |
| CDY52747 | Canola | nucleus | 24.22 | 36.9 |
| CDY07578 | Canola | nucleus | 24.22 | 36.9 |
| CDY65670 | Canola | nucleus | 25.78 | 36.87 |
| CDY18446 | Canola | nucleus | 25.78 | 36.67 |
| CDY07790 | Canola | nucleus | 25.78 | 36.46 |
| CDX70302 | Canola | nucleus | 37.11 | 35.85 |
| CDX80870 | Canola | nucleus | 35.55 | 35.83 |
| CDY10376 | Canola | nucleus | 36.33 | 35.09 |
| CDY11255 | Canola | nucleus | 34.77 | 35.04 |
| CDY31593 | Canola | nucleus | 21.48 | 34.38 |
| CDX80226 | Canola | nucleus | 21.48 | 34.16 |
| CDY41350 | Canola | nucleus, plastid | 33.59 | 34.13 |
| CDY71034 | Canola | nucleus | 32.42 | 33.88 |
| CDY09252 | Canola | nucleus | 20.7 | 33.76 |
| CDX71073 | Canola | nucleus | 20.7 | 33.54 |
| CDY11288 | Canola | nucleus | 42.97 | 33.43 |
| CDX70228 | Canola | nucleus | 42.19 | 33.33 |
| CDX88724 | Canola | nucleus | 20.7 | 33.33 |
| CDY04886 | Canola | nucleus | 34.77 | 33.21 |
| CDY44852 | Canola | nucleus | 41.8 | 32.92 |
| CDY44371 | Canola | nucleus | 34.38 | 32.84 |
| CDY65692 | Canola | nucleus | 20.31 | 32.5 |
| CDY58436 | Canola | nucleus | 42.97 | 32.35 |
| CDX68366 | Canola | nucleus | 22.27 | 32.2 |
| CDY08602 | Canola | nucleus | 41.41 | 31.36 |
| CDY00945 | Canola | nucleus | 40.62 | 30.77 |
| CDY61764 | Canola | nucleus | 40.62 | 30.59 |
| CDY58688 | Canola | nucleus | 10.55 | 30.34 |
| CDY30924 | Canola | nucleus | 19.92 | 30.0 |
| CDX99130 | Canola | nucleus | 21.48 | 28.65 |
| CDY30925 | Canola | nucleus | 17.97 | 27.22 |
| CDX86044 | Canola | nucleus | 21.48 | 26.96 |
| CDX89591 | Canola | nucleus | 21.09 | 25.96 |
| CDY42128 | Canola | nucleus | 21.09 | 24.22 |
| CDY05027 | Canola | nucleus | 13.67 | 20.96 |
Protein Annotations
| EnsemblPlants:CDY04544 | EnsemblPlantsGene:GSBRNA2T00118723001 | Gene3D:3.30.160.60 | GO:A0A078EVD6 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF318 |
| PFAM:PF13912 | PFscan:PS50157 | ProteinID:CDY04544 | ProteinID:CDY04544.1 | ScanProsite:PS00028 | SEG:seg |
| SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI0004EDE291 | MapMan:15.5.15 | : | : |
Description
BnaA07g13700D
Coordinates
chrLK031955:+:596861..597727
Molecular Weight (calculated)
27985.8 Da
IEP (calculated)
7.138
GRAVY (calculated)
-0.596
Length
256 amino acids
Sequence
(BLAST)
(BLAST)
001: MMGQDHEVGS DQTQIIKGKR TKRQRSSSST FLVAAAAPTI TSTSSSAGGE RTASEEYNSV VSSPVTTTDC TEEEEDMAIC LIMLARGAAP SPPLPDLKNS
101: TKTDKNLYQK NSSFYVYECK TCNRTFPSFQ ALGGHRASHK KPRASIDEKA KVPLTQLKSI HECSICGSEF TSGQALGGHM RRHRTVTNVV SSPVTAAEVS
201: RNSTDEETEN LSRSMEQRKY LPLDLNLPAP EDDLRESKFQ GIVFSATTPA LIDCHY
101: TKTDKNLYQK NSSFYVYECK TCNRTFPSFQ ALGGHRASHK KPRASIDEKA KVPLTQLKSI HECSICGSEF TSGQALGGHM RRHRTVTNVV SSPVTAAEVS
201: RNSTDEETEN LSRSMEQRKY LPLDLNLPAP EDDLRESKFQ GIVFSATTPA LIDCHY
001: MMMGQDEVGS DQTQIIKGKR TKRQRSSSTF VVTAATTVTS TSSSAGGSGG ERAVSDEYNS AVSSPVTTDC TQEEEDMAIC LIMLARGTVL PSPDLKNSRK
101: IHQKISSENS SFYVYECKTC NRTFSSFQAL GGHRASHKKP RTSTEEKTRL PLTQPKSSAS EEGQNSHFKV SGSALASQAS NIINKANKVH ECSICGSEFT
201: SGQALGGHMR RHRTAVTTIS PVAATAEVSR NSTEEEIEIN IGRSMEQQRK YLPLDLNLPA PEDDLRESKF QGIVFSATPA LIDCHY
101: IHQKISSENS SFYVYECKTC NRTFSSFQAL GGHRASHKKP RTSTEEKTRL PLTQPKSSAS EEGQNSHFKV SGSALASQAS NIINKANKVH ECSICGSEFT
201: SGQALGGHMR RHRTAVTTIS PVAATAEVSR NSTEEEIEIN IGRSMEQQRK YLPLDLNLPA PEDDLRESKF QGIVFSATPA LIDCHY
Arabidopsis Description
ZAT5Zinc finger protein ZAT5 [Source:UniProtKB/Swiss-Prot;Acc:Q681X4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.