Factsheet for Bra019477.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY30924	Canola	nucleus	98.24	98.24
Bra006691.1-P	Field mustard	nucleus	62.35	66.67
Bra006692.1-P	Field mustard	nucleus	62.35	66.67
Bra020284.1-P	Field mustard	nucleus	42.94	65.18
Bra019476.1-P	Field mustard	nucleus	64.71	65.09
Bra002528.1-P	Field mustard	nucleus	61.18	65.0
Bra018225.1-P	Field mustard	nucleus	71.18	63.02
AT3G46070.1	Thale cress	nucleus	61.76	61.76
Bra035678.1-P	Field mustard	nucleus	37.06	42.57
Bra011931.1-P	Field mustard	cytosol	37.06	42.0
Solyc11g073060.1.1	Tomato	nucleus	36.47	40.26
PGSC0003DMT400040143	Potato	nucleus	38.82	39.76
KRH24840	Soybean	nucleus	36.47	39.74
PGSC0003DMT400040207	Potato	nucleus	38.24	39.63
Solyc06g075780.1.1	Tomato	nucleus	35.88	39.61
KRH29844	Soybean	nucleus, plastid	33.53	39.58
PGSC0003DMT400040144	Potato	nucleus	38.24	39.39
PGSC0003DMT400040142	Potato	nucleus	37.65	38.79
KRH23029	Soybean	nucleus	38.24	38.01
PGSC0003DMT400077934	Potato	cytosol, nucleus, plastid	36.47	37.8
PGSC0003DMT400040141	Potato	nucleus	37.65	37.65
PGSC0003DMT400040206	Potato	nucleus	37.65	37.43
Bra017188.1-P	Field mustard	nucleus	39.41	37.22
Bra005197.1-P	Field mustard	nucleus	36.47	37.13
KRH10294	Soybean	nucleus	37.06	36.63
Bra003148.1-P	Field mustard	nucleus	32.94	33.33
Bra030981.1-P	Field mustard	nucleus	35.29	33.15
Bra039806.1-P	Field mustard	nucleus	31.76	31.03
Bra009525.1-P	Field mustard	nucleus	32.35	20.75
Bra005766.1-P	Field mustard	nucleus	33.53	20.65
Bra028831.1-P	Field mustard	nucleus	31.76	20.15
Bra011970.1-P	Field mustard	nucleus	32.35	19.1
Bra034116.1-P	Field mustard	plastid	31.18	19.06
Bra034396.1-P	Field mustard	nucleus	31.76	18.49
Bra029843.1-P	Field mustard	nucleus	31.76	16.62
Bra028791.1-P	Field mustard	nucleus	33.53	16.19
Bra005803.1-P	Field mustard	nucleus	32.94	15.6
Bra009457.1-P	Field mustard	nucleus	30.59	15.07

Protein Annotations

EnsemblPlants:Bra019477.1	EnsemblPlants:Bra019477.1-P	EnsemblPlantsGene:Bra019477	Gene3D:3.30.160.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0005488	InterPro:IPR013087	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	PANTHER:PTHR26374	PANTHER:PTHR26374:SF318
PFAM:PF13912	PFscan:PS50157	ScanProsite:PS00028	SEG:seg	SMART:SM00355	SUPFAM:SSF57667
UniParc:UPI000253F0F6	UniProt:M4DSI4	MapMan:15.5.15	:	:	:

Description

AT3G46090 (E=1e-054) ZAT7 | ZAT7; nucleic acid binding / transcription factor/ zinc ion binding

Coordinates

chrA06:+:13158164..13158676

Molecular Weight (calculated)

18828.8 Da

IEP (calculated)

10.125

GRAVY (calculated)

-0.558

Length

170 amino acids

Sequence
(BLAST)

001: MVARSENLDQ TVEDTEATCL MLLSRVGECG RERGETRVFR CKTCMKEFSS FQALGGHRAS HKKPVNNSSD EQSSSLSSGS VTKKTKKPLS HTCPICGLEF
101: PMGQALGGHM RKHRNEKERG ALVTRSFLPE AKFTTLKKSS SGKRVACFGM GLDPMERVIN LKLELGRTIY

Best Arabidopsis Sequence Match ( AT3G46080.1 )
(BLAST)

001: MVARSEEVEI VEDTAAKCLM LLSRVGECGG GGEKRVFRCK TCLKEFSSFQ ALGGHRASHK KLINSSDPSL LGSLSNKKTK TATSHPCPIC GVEFPMGQAL
101: GGHMRRHRSE KASPGTLVTR SFLPETTTVT TLKKSSSGKR VACLDLDSME SLVNWKLELG RTIS

Arabidopsis Description

ZAT8Zinc finger protein ZAT8 [Source:UniProtKB/Swiss-Prot;Acc:Q9LX85]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.