Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g075780.1.1 | Tomato | nucleus | 81.1 | 86.36 |
| PGSC0003DMT400040143 | Potato | nucleus | 60.98 | 60.24 |
| PGSC0003DMT400040142 | Potato | nucleus | 59.76 | 59.39 |
| PGSC0003DMT400040144 | Potato | nucleus | 59.15 | 58.79 |
| PGSC0003DMT400040207 | Potato | nucleus | 58.54 | 58.54 |
| PGSC0003DMT400040141 | Potato | nucleus | 59.15 | 57.06 |
| PGSC0003DMT400040206 | Potato | nucleus | 59.15 | 56.73 |
| PGSC0003DMT400060523 | Potato | mitochondrion | 42.07 | 50.0 |
| Bra020284.1-P | Field mustard | nucleus | 29.88 | 43.75 |
| PGSC0003DMT400077933 | Potato | nucleus | 41.46 | 43.31 |
| KRH29844 | Soybean | nucleus, plastid | 36.59 | 41.67 |
| KRH23029 | Soybean | nucleus | 43.29 | 41.52 |
| CDX71073 | Canola | nucleus | 39.63 | 41.14 |
| KRH24840 | Soybean | nucleus | 39.02 | 41.03 |
| Bra006692.1-P | Field mustard | nucleus | 39.63 | 40.88 |
| Bra006691.1-P | Field mustard | nucleus | 39.63 | 40.88 |
| CDX88724 | Canola | nucleus | 39.63 | 40.88 |
| KRH10294 | Soybean | nucleus | 42.68 | 40.7 |
| AT3G46080.1 | Thale cress | nucleus | 40.24 | 40.24 |
| CDY09252 | Canola | nucleus | 38.41 | 40.13 |
| CDY65692 | Canola | nucleus | 38.41 | 39.38 |
| AT3G46090.1 | Thale cress | nucleus | 40.24 | 39.29 |
| AT5G59820.1 | Thale cress | nucleus | 38.41 | 38.89 |
| CDY31593 | Canola | nucleus | 37.8 | 38.75 |
| PGSC0003DMT400090011 | Potato | nucleus | 36.59 | 38.71 |
| CDX80226 | Canola | nucleus | 37.8 | 38.51 |
| Bra002528.1-P | Field mustard | nucleus | 37.2 | 38.12 |
| AT3G46070.1 | Thale cress | nucleus | 38.41 | 37.06 |
| CDY30924 | Canola | nucleus | 37.8 | 36.47 |
| Bra019477.1-P | Field mustard | nucleus | 37.8 | 36.47 |
| CDX68366 | Canola | nucleus | 37.8 | 35.03 |
| CDX99130 | Canola | nucleus | 39.63 | 33.85 |
| Bra018225.1-P | Field mustard | nucleus | 39.63 | 33.85 |
| CDY58688 | Canola | nucleus | 17.68 | 32.58 |
| Bra019476.1-P | Field mustard | nucleus | 33.54 | 32.54 |
| CDY30925 | Canola | nucleus | 33.54 | 32.54 |
| CDX86044 | Canola | nucleus | 40.24 | 32.35 |
| PGSC0003DMT400021456 | Potato | nucleus | 37.8 | 32.29 |
| PGSC0003DMT400060463 | Potato | nucleus | 39.02 | 30.77 |
| PGSC0003DMT400001104 | Potato | nucleus | 41.46 | 23.37 |
| PGSC0003DMT400009871 | Potato | nucleus | 39.63 | 21.81 |
| PGSC0003DMT400018457 | Potato | nucleus | 41.46 | 20.67 |
| PGSC0003DMT400079773 | Potato | nucleus | 39.02 | 17.39 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400077934 | EnsemblPlantsGene:PGSC0003DMG401030312 | EntrezGene:102588802 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF198 |
| PFAM:PF13912 | PFscan:PS50157 | PGSC:PGSC0003DMG401030312 | RefSeq:XP_006350750.1 | ScanProsite:PS00028 | SMART:SM00355 |
| SUPFAM:SSF57667 | UniParc:UPI0002947E9D | UniProt:M1CZ27 | MapMan:15.5.15 | : | : |
Description
ZPT2-12 [Source:PGSC_GENE;Acc:PGSC0003DMG401030312]
Coordinates
chr6:+:56383260..56384106
Molecular Weight (calculated)
18629.7 Da
IEP (calculated)
10.399
GRAVY (calculated)
-0.521
Length
164 amino acids
Sequence
(BLAST)
(BLAST)
001: MTALMRKSRE DNGDVEAQAM ANCLMLLSSI DRDRRDSFEC KTCKRRFSSF QALGGHRTSH KSMKSTIDIG KFLHGKLSKK RKVHECLICG MEFSMGQALG
101: GHMRRHRAPV NEIKDSSSVR RIPVLKKSNS SKRIFCVDLN LTPDENDDFQ FWPTAPAPVL RCVI
101: GHMRRHRAPV NEIKDSSSVR RIPVLKKSNS SKRIFCVDLN LTPDENDDFQ FWPTAPAPVL RCVI
001: MKRERSDFEE SLKNIDIAKC LMILAQTSMV KQIGLNQHTE SHTSNQFECK TCNKRFSSFQ ALGGHRASHK KPKLTVEQKD VKHLSNDYKG NHFHKCSICS
101: QSFGTGQALG GHMRRHRSSM TVEPSFISPM IPSMPVLKRC GSSKRILSLD LNLTPLENDL EYIFGKTFVP KIDMKFVL
101: QSFGTGQALG GHMRRHRSSM TVEPSFISPM IPSMPVLKRC GSSKRILSLD LNLTPLENDL EYIFGKTFVP KIDMKFVL
Arabidopsis Description
ZAT11ZAT11 [Source:UniProtKB/TrEMBL;Acc:A0A178VNJ8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.