Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 4
- cytosol 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc10g045310.1.1 | Tomato | nucleus | 72.82 | 94.76 |
| VIT_11s0016g02630.t01 | Wine grape | cytosol | 55.37 | 82.91 |
| Bra011105.1-P | Field mustard | plastid | 56.38 | 56.76 |
| CDY43498 | Canola | plastid | 56.04 | 56.42 |
| CDY06810 | Canola | plastid | 55.37 | 55.37 |
| GSMUA_Achr8P24980_001 | Banana | plastid | 60.4 | 55.21 |
| Os01t0558800-01 | Rice | plastid | 51.01 | 54.09 |
| AT4G29400.1 | Thale cress | plastid | 54.7 | 53.97 |
| TraesCS3D01G206900.1 | Wheat | plastid | 49.66 | 53.62 |
| KRH37622 | Soybean | nucleus | 57.05 | 52.8 |
| Zm00001d011166_P001 | Maize | plastid | 51.01 | 52.6 |
| TraesCSU01G050100.1 | Wheat | plastid | 38.93 | 51.79 |
| KRH44778 | Soybean | plastid | 54.36 | 51.59 |
| EES06656 | Sorghum | plastid | 50.67 | 51.54 |
| HORVU3Hr1G048210.5 | Barley | plastid | 37.25 | 39.08 |
| PGSC0003DMT400031818 | Potato | plastid | 30.87 | 30.07 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400074006 | EnsemblPlantsGene:PGSC0003DMG400028767 | InterPro:DUF3531 | PANTHER:PTHR33102 | PANTHER:PTHR33102:SF2 | PFAM:PF12049 |
| PGSC:PGSC0003DMG400028767 | SEG:seg | UniParc:UPI00029606F8 | UniProt:M1CT01 | MapMan:35.2 | : |
Description
Oxidoreductase/ transition metal ion binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400028767]
Coordinates
chr10:+:33537359..33540698
Molecular Weight (calculated)
34118.1 Da
IEP (calculated)
4.767
GRAVY (calculated)
-0.519
Length
298 amino acids
Sequence
(BLAST)
(BLAST)
001: MMHLPHLSYT NLRLQITEKL CLQMFTLQHT AFLFQVPQNR VSPQWLTYLS SPIRSPFHFL PNQSSSQRAK TTDFLTLFEE EDNNDGDGVG DFQGREDDEK
101: NYDKDPELAD ILGTCLDDPD KAKSRLEERL RKKRNKIVHT KTGSPTPMTV EFNKFDYSNT YIWFEFYNAP LEKDISLICD TIRSWHIVGR LGGCNSMNMQ
201: LSQSPLDKRP NYDAVQGANV TPTTFYNIGD VEIQDNLARI WVDIGTSEPL LLDVLINALS QISSDYVGIK QVVFGGSEFE NWKENLTSED AGYSVHKI
101: NYDKDPELAD ILGTCLDDPD KAKSRLEERL RKKRNKIVHT KTGSPTPMTV EFNKFDYSNT YIWFEFYNAP LEKDISLICD TIRSWHIVGR LGGCNSMNMQ
201: LSQSPLDKRP NYDAVQGANV TPTTFYNIGD VEIQDNLARI WVDIGTSEPL LLDVLINALS QISSDYVGIK QVVFGGSEFE NWKENLTSED AGYSVHKI
001: MLRFQCFLHL LQPSMAKNNS NHSNICLHNL APFRVTDTIP VQKIQELRAN RSRESGKLRV NGIGREMEEG VEEFEEVDDG DDDEVEDEFS AKKRGVYRAK
101: KEKIDYDKDP EFADILGDCL DNPDKAQKKM EERLRKKRNK ILHTKTGSAT SMPVTFNKFE YSNSYMWLEF YNTPLDKDIA LISDTIRSWH ILGRLGGYNS
201: MNMQLSQAPL DKRPNYDAIL GANVEPTTFY NIGDLEVQDN VARIWLDIGT SEPLILDVLI NALTQISSDY VGIKKVVFGG SEFESWKENM TSEESGFRVH
301: KI
101: KEKIDYDKDP EFADILGDCL DNPDKAQKKM EERLRKKRNK ILHTKTGSAT SMPVTFNKFE YSNSYMWLEF YNTPLDKDIA LISDTIRSWH ILGRLGGYNS
201: MNMQLSQAPL DKRPNYDAIL GANVEPTTFY NIGDLEVQDN VARIWLDIGT SEPLILDVLI NALTQISSDY VGIKKVVFGG SEFESWKENM TSEESGFRVH
301: KI
Arabidopsis Description
Oxidoreductase/transition metal ion-binding protein (DUF3531) [Source:UniProtKB/TrEMBL;Acc:Q5XV66]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.