Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- nucleus 2
- plastid 1
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc10g045310.1.1 | Tomato | nucleus | 81.41 | 70.74 |
| PGSC0003DMT400074006 | Potato | cytosol, mitochondrion | 82.91 | 55.37 |
| Bra011105.1-P | Field mustard | plastid | 76.88 | 51.69 |
| CDY43498 | Canola | plastid | 76.88 | 51.69 |
| CDY06810 | Canola | plastid | 76.38 | 51.01 |
| AT4G29400.1 | Thale cress | plastid | 77.39 | 50.99 |
| GSMUA_Achr8P24980_001 | Banana | plastid | 82.91 | 50.61 |
| Os01t0558800-01 | Rice | plastid | 70.35 | 49.82 |
| KRH44778 | Soybean | plastid | 77.89 | 49.36 |
| EES06656 | Sorghum | plastid | 71.36 | 48.46 |
| Zm00001d011166_P001 | Maize | plastid | 70.35 | 48.44 |
| KRH37622 | Soybean | nucleus | 77.89 | 48.14 |
| TraesCS3D01G206900.1 | Wheat | plastid | 66.33 | 47.83 |
| TraesCSU01G050100.1 | Wheat | plastid | 49.75 | 44.2 |
| HORVU3Hr1G048210.5 | Barley | plastid | 49.25 | 34.51 |
| VIT_10s0071g01140.t01 | Wine grape | nucleus | 41.21 | 27.61 |
Protein Annotations
| EntrezGene:100257820 | wikigene:100257820 | MapMan:35.2 | ProteinID:CBI27953 | ProteinID:CBI27953.3 | UniProt:D7TBB8 |
| InterPro:DUF3531 | EMBL:FN595756 | EntrezGene:LOC100257820 | wikigene:LOC100257820 | PFAM:PF12049 | PANTHER:PTHR33102 |
| PANTHER:PTHR33102:SF2 | UniParc:UPI0001BE2FB8 | ArrayExpress:VIT_11s0016g02630 | EnsemblPlantsGene:VIT_11s0016g02630 | EnsemblPlants:VIT_11s0016g02630.t01 | unigene:Vvi.18600 |
| RefSeq:XP_002279951 | RefSeq:XP_002279951.1 | : | : | : | : |
Description
No Description!
Coordinates
chr11:-:2100756..2104323
Molecular Weight (calculated)
22699.0 Da
IEP (calculated)
5.681
GRAVY (calculated)
-0.382
Length
199 amino acids
Sequence
(BLAST)
(BLAST)
001: MDYDRNPEFA EILGSCLDDP QKARSKMEER LRRKRNKILH TKTGSALPMK VTFNKFDFSN TYIWFEFYNT PLAKDISLIC DALRSWHIVG RLGGCNSLNM
101: QLSQSPFDKR PSYDAIQGAN VNPTTFYNIG DLEIQDNLAR IWVDIGTSEP LLLDILINAL TQISSDYVGI KQLVFGGDEF ENWKENLTSE HAGCSVHKI
101: QLSQSPFDKR PSYDAIQGAN VNPTTFYNIG DLEIQDNLAR IWVDIGTSEP LLLDILINAL TQISSDYVGI KQLVFGGDEF ENWKENLTSE HAGCSVHKI
001: MLRFQCFLHL LQPSMAKNNS NHSNICLHNL APFRVTDTIP VQKIQELRAN RSRESGKLRV NGIGREMEEG VEEFEEVDDG DDDEVEDEFS AKKRGVYRAK
101: KEKIDYDKDP EFADILGDCL DNPDKAQKKM EERLRKKRNK ILHTKTGSAT SMPVTFNKFE YSNSYMWLEF YNTPLDKDIA LISDTIRSWH ILGRLGGYNS
201: MNMQLSQAPL DKRPNYDAIL GANVEPTTFY NIGDLEVQDN VARIWLDIGT SEPLILDVLI NALTQISSDY VGIKKVVFGG SEFESWKENM TSEESGFRVH
301: KI
101: KEKIDYDKDP EFADILGDCL DNPDKAQKKM EERLRKKRNK ILHTKTGSAT SMPVTFNKFE YSNSYMWLEF YNTPLDKDIA LISDTIRSWH ILGRLGGYNS
201: MNMQLSQAPL DKRPNYDAIL GANVEPTTFY NIGDLEVQDN VARIWLDIGT SEPLILDVLI NALTQISSDY VGIKKVVFGG SEFESWKENM TSEESGFRVH
301: KI
Arabidopsis Description
Oxidoreductase/transition metal ion-binding protein (DUF3531) [Source:UniProtKB/TrEMBL;Acc:Q5XV66]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.