Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G048210.5 | Barley | plastid | 83.93 | 66.2 |
| TraesCS3D01G206900.1 | Wheat | plastid | 73.21 | 59.42 |
| Os01t0558800-01 | Rice | plastid | 66.07 | 52.67 |
| EES06656 | Sorghum | plastid | 65.18 | 49.83 |
| VIT_11s0016g02630.t01 | Wine grape | cytosol | 44.2 | 49.75 |
| Zm00001d011166_P001 | Maize | plastid | 61.61 | 47.75 |
| Solyc10g045310.1.1 | Tomato | nucleus | 48.66 | 47.6 |
| PGSC0003DMT400074006 | Potato | cytosol, mitochondrion | 51.79 | 38.93 |
| GSMUA_Achr8P24980_001 | Banana | plastid | 52.23 | 35.89 |
| Bra011105.1-P | Field mustard | plastid | 45.54 | 34.46 |
| CDY43498 | Canola | plastid | 45.54 | 34.46 |
| CDY06810 | Canola | plastid | 44.2 | 33.22 |
| AT4G29400.1 | Thale cress | plastid | 44.64 | 33.11 |
| KRH37622 | Soybean | nucleus | 46.88 | 32.61 |
| KRH44778 | Soybean | plastid | 44.64 | 31.85 |
Protein Annotations
| EnsemblPlants:TraesCSU01G050100.1 | EnsemblPlantsGene:TraesCSU01G050100 | InterPro:DUF3531 | PANTHER:PTHR33102 | PANTHER:PTHR33102:SF2 | PFAM:PF12049 |
| SEG:seg | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chrUn:-:39707513..39720225
Molecular Weight (calculated)
25440.3 Da
IEP (calculated)
6.398
GRAVY (calculated)
-0.529
Length
224 amino acids
Sequence
(BLAST)
(BLAST)
001: MLPTLLGGYL TVSALPHPTA TATPRARVLP GLRPSSRLVA RRSAGETVHA TATEEEEQEW KELQEEGLPM RGQHAEDDHD HDPEIADIMG DYFDDPKKAQ
101: SRMEERIKKK RHKIVQAKTG SPNPMKVVFN KFDFSNSYIW FEFYNALLPK DVKLICDTLR SWHILGRLGG CNSMNMQLSQ LSLDCKRPTY DALEAANTTP
201: TSFYNIGDLE IQENLARVWC GFFL
101: SRMEERIKKK RHKIVQAKTG SPNPMKVVFN KFDFSNSYIW FEFYNALLPK DVKLICDTLR SWHILGRLGG CNSMNMQLSQ LSLDCKRPTY DALEAANTTP
201: TSFYNIGDLE IQENLARVWC GFFL
001: MLRFQCFLHL LQPSMAKNNS NHSNICLHNL APFRVTDTIP VQKIQELRAN RSRESGKLRV NGIGREMEEG VEEFEEVDDG DDDEVEDEFS AKKRGVYRAK
101: KEKIDYDKDP EFADILGDCL DNPDKAQKKM EERLRKKRNK ILHTKTGSAT SMPVTFNKFE YSNSYMWLEF YNTPLDKDIA LISDTIRSWH ILGRLGGYNS
201: MNMQLSQAPL DKRPNYDAIL GANVEPTTFY NIGDLEVQDN VARIWLDIGT SEPLILDVLI NALTQISSDY VGIKKVVFGG SEFESWKENM TSEESGFRVH
301: KI
101: KEKIDYDKDP EFADILGDCL DNPDKAQKKM EERLRKKRNK ILHTKTGSAT SMPVTFNKFE YSNSYMWLEF YNTPLDKDIA LISDTIRSWH ILGRLGGYNS
201: MNMQLSQAPL DKRPNYDAIL GANVEPTTFY NIGDLEVQDN VARIWLDIGT SEPLILDVLI NALTQISSDY VGIKKVVFGG SEFESWKENM TSEESGFRVH
301: KI
Arabidopsis Description
Oxidoreductase/transition metal ion-binding protein (DUF3531) [Source:UniProtKB/TrEMBL;Acc:Q5XV66]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.