Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G050100.1 | Wheat | plastid | 66.2 | 83.93 |
| TraesCS3D01G206900.1 | Wheat | plastid | 55.63 | 57.25 |
| Os01t0558800-01 | Rice | plastid | 50.7 | 51.25 |
| VIT_11s0016g02630.t01 | Wine grape | cytosol | 34.51 | 49.25 |
| EES06656 | Sorghum | plastid | 50.35 | 48.81 |
| Solyc10g045310.1.1 | Tomato | nucleus | 37.68 | 46.72 |
| Zm00001d011166_P001 | Maize | plastid | 46.48 | 45.67 |
| PGSC0003DMT400074006 | Potato | cytosol, mitochondrion | 39.08 | 37.25 |
| GSMUA_Achr8P24980_001 | Banana | plastid | 41.55 | 36.2 |
| Bra011105.1-P | Field mustard | plastid | 37.68 | 36.15 |
| CDY43498 | Canola | plastid | 37.68 | 36.15 |
| CDY06810 | Canola | plastid | 36.97 | 35.23 |
| AT4G29400.1 | Thale cress | plastid | 35.21 | 33.11 |
| KRH37622 | Soybean | nucleus | 36.27 | 31.99 |
| KRH44778 | Soybean | plastid | 34.15 | 30.89 |
| HORVU6Hr1G087420.4 | Barley | plastid | 23.24 | 22.45 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G048210.5 | EnsemblPlantsGene:HORVU3Hr1G048210 | InterPro:DUF3531 | PANTHER:PTHR33102 | PANTHER:PTHR33102:SF2 | PFAM:PF12049 |
| SEG:seg | UniParc:UPI000B477B42 | UniProt:A0A287KYZ6 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chrchr3H:+:331630800..331636679
Molecular Weight (calculated)
31940.0 Da
IEP (calculated)
9.740
GRAVY (calculated)
-0.641
Length
284 amino acids
Sequence
(BLAST)
(BLAST)
001: YTLLRSLPSP SLGSSTSDVP PRSSRRRGWP RGRNTRLSIS SAPPAGYQQP ANKPGRTRML PTLLGGYLTV SALPLPLPTA TATPRTRILP GLRPSSRLVA
101: RRSAGETVHA TATEEEEQEW KELQEEGLPR RGQHTEDDHD HDPEIADIMG DYFDDPKKAQ SRMEERIKKK RHKIVQAKTG SPNPMNVVFN KFDFSNSYIW
201: FEFHNALLPK DVKLICDALR SWHILGRLGG CNSMNMQLSQ LSLDCKRPTY DALKAANATP TSFYNIGDLE IQENLARVWC GFFL
101: RRSAGETVHA TATEEEEQEW KELQEEGLPR RGQHTEDDHD HDPEIADIMG DYFDDPKKAQ SRMEERIKKK RHKIVQAKTG SPNPMNVVFN KFDFSNSYIW
201: FEFHNALLPK DVKLICDALR SWHILGRLGG CNSMNMQLSQ LSLDCKRPTY DALKAANATP TSFYNIGDLE IQENLARVWC GFFL
001: MLRFQCFLHL LQPSMAKNNS NHSNICLHNL APFRVTDTIP VQKIQELRAN RSRESGKLRV NGIGREMEEG VEEFEEVDDG DDDEVEDEFS AKKRGVYRAK
101: KEKIDYDKDP EFADILGDCL DNPDKAQKKM EERLRKKRNK ILHTKTGSAT SMPVTFNKFE YSNSYMWLEF YNTPLDKDIA LISDTIRSWH ILGRLGGYNS
201: MNMQLSQAPL DKRPNYDAIL GANVEPTTFY NIGDLEVQDN VARIWLDIGT SEPLILDVLI NALTQISSDY VGIKKVVFGG SEFESWKENM TSEESGFRVH
301: KI
101: KEKIDYDKDP EFADILGDCL DNPDKAQKKM EERLRKKRNK ILHTKTGSAT SMPVTFNKFE YSNSYMWLEF YNTPLDKDIA LISDTIRSWH ILGRLGGYNS
201: MNMQLSQAPL DKRPNYDAIL GANVEPTTFY NIGDLEVQDN VARIWLDIGT SEPLILDVLI NALTQISSDY VGIKKVVFGG SEFESWKENM TSEESGFRVH
301: KI
Arabidopsis Description
Oxidoreductase/transition metal ion-binding protein (DUF3531) [Source:UniProtKB/TrEMBL;Acc:Q5XV66]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.