Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G371300.1 | Wheat | plastid | 90.48 | 94.66 |
| TraesCS6B01G408300.1 | Wheat | mitochondrion, plastid | 89.46 | 93.59 |
| TraesCS6D01G355200.1 | Wheat | plastid | 91.84 | 93.43 |
| OQU85906 | Sorghum | cytosol | 15.31 | 91.84 |
| EES07795 | Sorghum | plastid | 78.57 | 80.77 |
| Zm00001d051851_P005 | Maize | plastid | 76.19 | 80.58 |
| Os02t0827600-01 | Rice | mitochondrion | 73.47 | 78.26 |
| CDY44774 | Canola | cytosol | 19.73 | 62.37 |
| CDX81102 | Canola | endoplasmic reticulum, vacuole | 58.5 | 57.72 |
| Solyc08g081080.2.1 | Tomato | cytosol | 53.4 | 56.68 |
| CDY40748 | Canola | plastid | 56.46 | 56.66 |
| VIT_10s0071g01140.t01 | Wine grape | nucleus | 56.8 | 56.23 |
| Bra028658.1-P | Field mustard | plastid | 56.8 | 55.67 |
| KRH64843 | Soybean | nucleus | 57.48 | 55.59 |
| KRG93163 | Soybean | nucleus | 56.46 | 55.15 |
| GSMUA_Achr3P00100_001 | Banana | plastid | 59.18 | 54.89 |
| PGSC0003DMT400031818 | Potato | plastid | 53.74 | 51.63 |
| Bra005991.1-P | Field mustard | cytosol | 57.82 | 51.36 |
| CDY60226 | Canola | cytosol | 57.48 | 50.9 |
| AT5G08400.1 | Thale cress | plastid | 57.14 | 50.45 |
| HORVU3Hr1G048210.5 | Barley | plastid | 22.45 | 23.24 |
Protein Annotations
| EMBL:AK361847 | EnsemblPlants:HORVU6Hr1G087420.4 | EnsemblPlantsGene:HORVU6Hr1G087420 | InterPro:DUF3531 | PANTHER:PTHR33102 | PANTHER:PTHR33102:SF13 |
| PFAM:PF12049 | SEG:seg | UniParc:UPI0002005E6F | UniProt:F2DD80 | MapMan:35.2 | : |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DD80]
Coordinates
chrchr6H:-:564067024..564070354
Molecular Weight (calculated)
32822.8 Da
IEP (calculated)
6.965
GRAVY (calculated)
-0.487
Length
294 amino acids
Sequence
(BLAST)
(BLAST)
001: MPRAHLAATM PLLAPAGKTL FPSRLPPPPS PRLHLHLRRA TATAAGGRGD GAAEASAASG TSARDRRLAR VREERRRREY DREHTYPGWA RVLENACRDD
101: EEMRAILGDS IGNPELMKQR IQERVRAKGR DGFNRPKTGS VAAFKVSFRD FNPLNAFIWF ELFGEPTDRD VDLLGGVIQA WYVMGRLGAF NSSNLQLANS
201: MLDFDPSYDS EEASAVMPSS FHDISDVEFQ DSWGRVWVDL GTSDHLGLDV LLNCLTQLSS EHLGIKQIVF GGRKLGDWEE GMTSSDYGYK HFKI
101: EEMRAILGDS IGNPELMKQR IQERVRAKGR DGFNRPKTGS VAAFKVSFRD FNPLNAFIWF ELFGEPTDRD VDLLGGVIQA WYVMGRLGAF NSSNLQLANS
201: MLDFDPSYDS EEASAVMPSS FHDISDVEFQ DSWGRVWVDL GTSDHLGLDV LLNCLTQLSS EHLGIKQIVF GGRKLGDWEE GMTSSDYGYK HFKI
001: MYENNLLTLS SCTMNLNFAF SPFLVSQRQP FSSHKRNLHT LVAVSANSDN LAGEDNGGIS AANKGSGTTA RGRRLLKVRE EKRKRDYDRL HDYPSWAKVL
101: ESACKDDEEL RAVLGDSIGN PELMRKKVEE RVRKKGKDFQ KQKTGSVLSF KVNFRDFNPV DSFIWFELYG TPSDRDVDLI GSVIQAWYVM GRLGAFNTSN
201: LQLANTSLEY DPLYDAEKGF KVMPSSFHDI SDVEFQDNWG RVWVDLGTSD IFALDVLLNC LTVMSSEYLG IQQVVFGGKR MGDWEEGMTN PDFGYKYFKI
101: ESACKDDEEL RAVLGDSIGN PELMRKKVEE RVRKKGKDFQ KQKTGSVLSF KVNFRDFNPV DSFIWFELYG TPSDRDVDLI GSVIQAWYVM GRLGAFNTSN
201: LQLANTSLEY DPLYDAEKGF KVMPSSFHDI SDVEFQDNWG RVWVDLGTSD IFALDVLLNC LTVMSSEYLG IQQVVFGGKR MGDWEEGMTN PDFGYKYFKI
Arabidopsis Description
At5g08400/F8L15_130 [Source:UniProtKB/TrEMBL;Acc:Q8VZD1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.