Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G408300.1 | Wheat | mitochondrion, plastid | 91.0 | 93.59 |
| HORVU6Hr1G087420.4 | Barley | plastid | 93.43 | 91.84 |
| OQU85906 | Sorghum | cytosol | 15.57 | 91.84 |
| TraesCS6A01G371300.1 | Wheat | plastid | 89.27 | 91.81 |
| Zm00001d051851_P005 | Maize | plastid | 77.51 | 80.58 |
| EES07795 | Sorghum | plastid | 79.58 | 80.42 |
| Os02t0827600-01 | Rice | mitochondrion | 76.12 | 79.71 |
| CDY44774 | Canola | cytosol | 20.42 | 63.44 |
| CDX81102 | Canola | endoplasmic reticulum, vacuole | 59.52 | 57.72 |
| Solyc08g081080.2.1 | Tomato | cytosol | 55.02 | 57.4 |
| CDY40748 | Canola | plastid | 58.13 | 57.34 |
| VIT_10s0071g01140.t01 | Wine grape | nucleus | 57.79 | 56.23 |
| Bra028658.1-P | Field mustard | plastid | 58.13 | 56.0 |
| GSMUA_Achr3P00100_001 | Banana | plastid | 61.25 | 55.84 |
| KRG93163 | Soybean | nucleus | 57.09 | 54.82 |
| KRH64843 | Soybean | nucleus | 57.44 | 54.61 |
| PGSC0003DMT400031818 | Potato | plastid | 55.36 | 52.29 |
| Bra005991.1-P | Field mustard | cytosol | 58.13 | 50.76 |
| AT5G08400.1 | Thale cress | plastid | 58.48 | 50.75 |
| CDY60226 | Canola | cytosol | 58.13 | 50.6 |
| TraesCS3D01G206900.1 | Wheat | plastid | 30.8 | 32.25 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G355200.1 | EnsemblPlantsGene:TraesCS6D01G355200 | InterPro:DUF3531 | PANTHER:PTHR33102 | PANTHER:PTHR33102:SF13 | PFAM:PF12049 |
| SEG:seg | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr6D:+:450110522..450113216
Molecular Weight (calculated)
32394.3 Da
IEP (calculated)
7.218
GRAVY (calculated)
-0.468
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: MPRAHLAVTM PLLAPAAKTL FLSRLQPPTS PRLHLRRATA TAAGGRGDGA SAASGTSARD RRLARVREER RRREYDREHT YPGWARVLEN ACRDDEEMRA
101: ILGDSIGNPE LMKQRIQERV RAKGREGFNR PKTGSVAAFK VSFRDFNPLN AFIWFELFGE PTDRDVDLLG GVIQAWYVMG RLGAFNSSNL QLANSMLDFD
201: PSYDSEEASA VMPSSFHDIS DVEFQDSWGR VWVDLGTSDH LGLDVLLNCL TQLSSEHLGI KQVVFGGRKL GDWEEGMTSS DYGYKHFKI
101: ILGDSIGNPE LMKQRIQERV RAKGREGFNR PKTGSVAAFK VSFRDFNPLN AFIWFELFGE PTDRDVDLLG GVIQAWYVMG RLGAFNSSNL QLANSMLDFD
201: PSYDSEEASA VMPSSFHDIS DVEFQDSWGR VWVDLGTSDH LGLDVLLNCL TQLSSEHLGI KQVVFGGRKL GDWEEGMTSS DYGYKHFKI
001: MYENNLLTLS SCTMNLNFAF SPFLVSQRQP FSSHKRNLHT LVAVSANSDN LAGEDNGGIS AANKGSGTTA RGRRLLKVRE EKRKRDYDRL HDYPSWAKVL
101: ESACKDDEEL RAVLGDSIGN PELMRKKVEE RVRKKGKDFQ KQKTGSVLSF KVNFRDFNPV DSFIWFELYG TPSDRDVDLI GSVIQAWYVM GRLGAFNTSN
201: LQLANTSLEY DPLYDAEKGF KVMPSSFHDI SDVEFQDNWG RVWVDLGTSD IFALDVLLNC LTVMSSEYLG IQQVVFGGKR MGDWEEGMTN PDFGYKYFKI
101: ESACKDDEEL RAVLGDSIGN PELMRKKVEE RVRKKGKDFQ KQKTGSVLSF KVNFRDFNPV DSFIWFELYG TPSDRDVDLI GSVIQAWYVM GRLGAFNTSN
201: LQLANTSLEY DPLYDAEKGF KVMPSSFHDI SDVEFQDNWG RVWVDLGTSD IFALDVLLNC LTVMSSEYLG IQQVVFGGKR MGDWEEGMTN PDFGYKYFKI
Arabidopsis Description
At5g08400/F8L15_130 [Source:UniProtKB/TrEMBL;Acc:Q8VZD1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.