Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
- golgi 1
- cytosol 1
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY44774 | Canola | cytosol | 30.67 | 98.92 |
| CDY40748 | Canola | plastid | 86.33 | 88.4 |
| OQU85906 | Sorghum | cytosol | 13.0 | 79.59 |
| Bra005991.1-P | Field mustard | cytosol | 84.0 | 76.13 |
| AT5G08400.1 | Thale cress | plastid | 83.0 | 74.77 |
| Solyc08g081080.2.1 | Tomato | cytosol | 68.0 | 73.65 |
| VIT_10s0071g01140.t01 | Wine grape | nucleus | 70.33 | 71.04 |
| PGSC0003DMT400031818 | Potato | plastid | 70.0 | 68.63 |
| KRH64843 | Soybean | nucleus | 68.0 | 67.11 |
| KRG93163 | Soybean | nucleus | 66.67 | 66.45 |
| GSMUA_Achr3P00100_001 | Banana | plastid | 67.67 | 64.04 |
| Zm00001d051851_P005 | Maize | plastid | 58.33 | 62.95 |
| EES07795 | Sorghum | plastid | 59.67 | 62.59 |
| Os02t0827600-01 | Rice | mitochondrion | 55.67 | 60.51 |
| TraesCS6A01G371300.1 | Wheat | plastid | 56.0 | 59.79 |
| TraesCS6B01G408300.1 | Wheat | mitochondrion, plastid | 55.67 | 59.43 |
| TraesCS6D01G355200.1 | Wheat | plastid | 56.0 | 58.13 |
| HORVU6Hr1G087420.4 | Barley | plastid | 55.67 | 56.8 |
| Bra011105.1-P | Field mustard | plastid | 29.33 | 29.73 |
Protein Annotations
Description
AT5G08400 (E=4e-133) | unknown protein
Coordinates
chrA02:-:2662756..2664418
Molecular Weight (calculated)
34010.3 Da
IEP (calculated)
6.953
GRAVY (calculated)
-0.474
Length
300 amino acids
Sequence
(BLAST)
(BLAST)
001: MYKTHLLSLS SCTLNLNLPL SPFLVSQRQP LSLHKRNLPS LFSVSATSDN MSGENDGGMS ADKKGSGTTA RGRRLLKVRE EKRKRDYDRL HDYPSWAKVL
101: ESACKDDEEL RAVLGDSIGN PELMRKKVEE RVRKKGKDFQ KQKSGSVLSF KVSFRDFNPV DSFIWFELYG SPSDRDVDLI GSVIQAWYVM GRLGAFNTSN
201: LQLANSSMEY DPLYDAEKGF KVMPSSFHDI SDVEFQDNWG RVWVDLGTSD IFALDVLLNS LTVVSSEYLG IQQVVFGGKR MGDWEEGMTN PDFGYKYFKI
101: ESACKDDEEL RAVLGDSIGN PELMRKKVEE RVRKKGKDFQ KQKSGSVLSF KVSFRDFNPV DSFIWFELYG SPSDRDVDLI GSVIQAWYVM GRLGAFNTSN
201: LQLANSSMEY DPLYDAEKGF KVMPSSFHDI SDVEFQDNWG RVWVDLGTSD IFALDVLLNS LTVVSSEYLG IQQVVFGGKR MGDWEEGMTN PDFGYKYFKI
001: MYENNLLTLS SCTMNLNFAF SPFLVSQRQP FSSHKRNLHT LVAVSANSDN LAGEDNGGIS AANKGSGTTA RGRRLLKVRE EKRKRDYDRL HDYPSWAKVL
101: ESACKDDEEL RAVLGDSIGN PELMRKKVEE RVRKKGKDFQ KQKTGSVLSF KVNFRDFNPV DSFIWFELYG TPSDRDVDLI GSVIQAWYVM GRLGAFNTSN
201: LQLANTSLEY DPLYDAEKGF KVMPSSFHDI SDVEFQDNWG RVWVDLGTSD IFALDVLLNC LTVMSSEYLG IQQVVFGGKR MGDWEEGMTN PDFGYKYFKI
101: ESACKDDEEL RAVLGDSIGN PELMRKKVEE RVRKKGKDFQ KQKTGSVLSF KVNFRDFNPV DSFIWFELYG TPSDRDVDLI GSVIQAWYVM GRLGAFNTSN
201: LQLANTSLEY DPLYDAEKGF KVMPSSFHDI SDVEFQDNWG RVWVDLGTSD IFALDVLLNC LTVMSSEYLG IQQVVFGGKR MGDWEEGMTN PDFGYKYFKI
Arabidopsis Description
At5g08400/F8L15_130 [Source:UniProtKB/TrEMBL;Acc:Q8VZD1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.