Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- plastid 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY60226 | Canola | cytosol | 94.56 | 94.28 |
| Bra028658.1-P | Field mustard | plastid | 76.13 | 84.0 |
| OQU85906 | Sorghum | cytosol | 11.78 | 79.59 |
| Solyc08g081080.2.1 | Tomato | cytosol | 61.63 | 73.65 |
| VIT_10s0071g01140.t01 | Wine grape | nucleus | 63.75 | 71.04 |
| AT5G08400.1 | Thale cress | plastid | 71.3 | 70.87 |
| PGSC0003DMT400031818 | Potato | plastid | 62.54 | 67.65 |
| KRG93163 | Soybean | nucleus | 61.03 | 67.11 |
| KRH64843 | Soybean | nucleus | 61.03 | 66.45 |
| GSMUA_Achr3P00100_001 | Banana | plastid | 61.33 | 64.04 |
| EES07795 | Sorghum | plastid | 54.08 | 62.59 |
| Zm00001d051851_P005 | Maize | plastid | 52.27 | 62.23 |
| Os02t0827600-01 | Rice | mitochondrion | 50.15 | 60.14 |
| TraesCS6B01G408300.1 | Wheat | mitochondrion, plastid | 51.06 | 60.14 |
| TraesCS6A01G371300.1 | Wheat | plastid | 50.15 | 59.07 |
| TraesCS6D01G355200.1 | Wheat | plastid | 50.76 | 58.13 |
| HORVU6Hr1G087420.4 | Barley | plastid | 51.36 | 57.82 |
| Bra011105.1-P | Field mustard | plastid | 27.79 | 31.08 |
Protein Annotations
Description
AT5G08400 (E=1e-138) | unknown protein
Coordinates
chrA03:-:1520215..1521869
Molecular Weight (calculated)
37495.5 Da
IEP (calculated)
5.538
GRAVY (calculated)
-0.422
Length
331 amino acids
Sequence
(BLAST)
(BLAST)
001: MITMSLISEN GADFILNLSL ISYRNEHRSK KEAEMYKSPL LSLSACTISL NLPFLVSQSQ TLSLYKRNLP SLFAVSANSD NISGENDGGM SEANKGSGTT
101: ARGRRLLKVR EEKRKRDYDR LHDYPSWAKV LESACKDDEE LRAVLGDSIG NPDLMRKKVE ERVRKKGKDF QKQKTGSVLS FKVSFRDFNP VDSFIWFELY
201: GSPSDRDVDL IGSIIQAWYV MGRLGAFNTS NLQLANSSME YDPLYDAEKG FKVMPSSFHD ISDVEFQDNW GRVWVDLGTS DIFALDVLLN SLTVMSSEYL
301: GIQQVVFGGK RMGDWEEGMT NPDFGYKYFK I
101: ARGRRLLKVR EEKRKRDYDR LHDYPSWAKV LESACKDDEE LRAVLGDSIG NPDLMRKKVE ERVRKKGKDF QKQKTGSVLS FKVSFRDFNP VDSFIWFELY
201: GSPSDRDVDL IGSIIQAWYV MGRLGAFNTS NLQLANSSME YDPLYDAEKG FKVMPSSFHD ISDVEFQDNW GRVWVDLGTS DIFALDVLLN SLTVMSSEYL
301: GIQQVVFGGK RMGDWEEGMT NPDFGYKYFK I
001: MYENNLLTLS SCTMNLNFAF SPFLVSQRQP FSSHKRNLHT LVAVSANSDN LAGEDNGGIS AANKGSGTTA RGRRLLKVRE EKRKRDYDRL HDYPSWAKVL
101: ESACKDDEEL RAVLGDSIGN PELMRKKVEE RVRKKGKDFQ KQKTGSVLSF KVNFRDFNPV DSFIWFELYG TPSDRDVDLI GSVIQAWYVM GRLGAFNTSN
201: LQLANTSLEY DPLYDAEKGF KVMPSSFHDI SDVEFQDNWG RVWVDLGTSD IFALDVLLNC LTVMSSEYLG IQQVVFGGKR MGDWEEGMTN PDFGYKYFKI
101: ESACKDDEEL RAVLGDSIGN PELMRKKVEE RVRKKGKDFQ KQKTGSVLSF KVNFRDFNPV DSFIWFELYG TPSDRDVDLI GSVIQAWYVM GRLGAFNTSN
201: LQLANTSLEY DPLYDAEKGF KVMPSSFHDI SDVEFQDNWG RVWVDLGTSD IFALDVLLNC LTVMSSEYLG IQQVVFGGKR MGDWEEGMTN PDFGYKYFKI
Arabidopsis Description
At5g08400/F8L15_130 [Source:UniProtKB/TrEMBL;Acc:Q8VZD1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.