Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plasma membrane 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400031818 | Potato | plastid | 92.06 | 83.33 |
| CDY44774 | Canola | cytosol | 27.44 | 81.72 |
| OQU85906 | Sorghum | cytosol | 12.64 | 71.43 |
| CDX81102 | Canola | endoplasmic reticulum, vacuole | 74.73 | 69.46 |
| VIT_10s0071g01140.t01 | Wine grape | nucleus | 74.37 | 69.36 |
| CDY40748 | Canola | plastid | 73.29 | 69.28 |
| Bra028658.1-P | Field mustard | plastid | 73.65 | 68.0 |
| KRG93163 | Soybean | nucleus | 70.76 | 65.12 |
| KRH64843 | Soybean | nucleus | 71.12 | 64.8 |
| CDY60226 | Canola | cytosol | 74.01 | 61.75 |
| Bra005991.1-P | Field mustard | cytosol | 73.65 | 61.63 |
| GSMUA_Achr3P00100_001 | Banana | plastid | 70.4 | 61.51 |
| AT5G08400.1 | Thale cress | plastid | 72.2 | 60.06 |
| Zm00001d051851_P005 | Maize | plastid | 59.93 | 59.71 |
| EES07795 | Sorghum | plastid | 59.93 | 58.04 |
| Os02t0827600-01 | Rice | mitochondrion | 57.4 | 57.61 |
| TraesCS6B01G408300.1 | Wheat | mitochondrion, plastid | 57.4 | 56.58 |
| TraesCS6A01G371300.1 | Wheat | plastid | 57.04 | 56.23 |
| TraesCS6D01G355200.1 | Wheat | plastid | 57.4 | 55.02 |
| HORVU6Hr1G087420.4 | Barley | plastid | 56.68 | 53.4 |
| Solyc10g045310.1.1 | Tomato | nucleus | 31.41 | 37.99 |
Protein Annotations
| EnsemblPlants:Solyc08g081080.2.1 | EnsemblPlantsGene:Solyc08g081080.2 | InterPro:DUF3531 | PANTHER:PTHR33102 | PANTHER:PTHR33102:SF13 | PFAM:PF12049 |
| SEG:seg | UniParc:UPI000276BCE8 | UniProt:K4CPA6 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr8:-:64194803..64198423
Molecular Weight (calculated)
31149.6 Da
IEP (calculated)
5.479
GRAVY (calculated)
-0.436
Length
277 amino acids
Sequence
(BLAST)
(BLAST)
001: MPMSNRELSV VSTIAAAKST ASIGEGNDDY VDISSGKAAA KGSGTTARGR RLLKVREEKR KREYERLHNY PAWAKVLEDA CKHDTELRAV LGDSIGNPEL
101: MRKKVEERVR TKGRNFQKSK TGSVLAFKVS FRDFNPLDSY IWFELYGSPS DRDVNIFGSV IQAWYVMGRL GAFNSSNLQL GGSSMEFNPL YDAEKGFNVM
201: PSSFHDISNV EFQDNWSRVW VDLGTADFFS IDVLLNCLTV LSSEYVGIQQ VVFGGQRMGD WEEGMTNSDD GYKYFEI
101: MRKKVEERVR TKGRNFQKSK TGSVLAFKVS FRDFNPLDSY IWFELYGSPS DRDVNIFGSV IQAWYVMGRL GAFNSSNLQL GGSSMEFNPL YDAEKGFNVM
201: PSSFHDISNV EFQDNWSRVW VDLGTADFFS IDVLLNCLTV LSSEYVGIQQ VVFGGQRMGD WEEGMTNSDD GYKYFEI
001: MYENNLLTLS SCTMNLNFAF SPFLVSQRQP FSSHKRNLHT LVAVSANSDN LAGEDNGGIS AANKGSGTTA RGRRLLKVRE EKRKRDYDRL HDYPSWAKVL
101: ESACKDDEEL RAVLGDSIGN PELMRKKVEE RVRKKGKDFQ KQKTGSVLSF KVNFRDFNPV DSFIWFELYG TPSDRDVDLI GSVIQAWYVM GRLGAFNTSN
201: LQLANTSLEY DPLYDAEKGF KVMPSSFHDI SDVEFQDNWG RVWVDLGTSD IFALDVLLNC LTVMSSEYLG IQQVVFGGKR MGDWEEGMTN PDFGYKYFKI
101: ESACKDDEEL RAVLGDSIGN PELMRKKVEE RVRKKGKDFQ KQKTGSVLSF KVNFRDFNPV DSFIWFELYG TPSDRDVDLI GSVIQAWYVM GRLGAFNTSN
201: LQLANTSLEY DPLYDAEKGF KVMPSSFHDI SDVEFQDNWG RVWVDLGTSD IFALDVLLNC LTVMSSEYLG IQQVVFGGKR MGDWEEGMTN PDFGYKYFKI
Arabidopsis Description
At5g08400/F8L15_130 [Source:UniProtKB/TrEMBL;Acc:Q8VZD1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.