CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU85906	Sorghum	cytosol	16.78	97.96
Zm00001d051851_P005	Maize	plastid	86.71	89.21
Os02t0827600-01	Rice	mitochondrion	80.42	83.33
TraesCS6B01G408300.1	Wheat	mitochondrion, plastid	81.47	82.92
TraesCS6A01G371300.1	Wheat	plastid	79.02	80.43
TraesCS6D01G355200.1	Wheat	plastid	80.42	79.58
HORVU6Hr1G087420.4	Barley	plastid	80.77	78.57
CDY44774	Canola	cytosol	22.03	67.74
CDY40748	Canola	plastid	62.24	60.75
CDX81102	Canola	endoplasmic reticulum, vacuole	62.94	60.4
Solyc08g081080.2.1	Tomato	cytosol	58.04	59.93
Bra028658.1-P	Field mustard	plastid	62.59	59.67
VIT_10s0071g01140.t01	Wine grape	nucleus	60.49	58.25
KRH64843	Soybean	nucleus	61.54	57.89
KRG93163	Soybean	nucleus	60.84	57.81
GSMUA_Achr3P00100_001	Banana	plastid	61.89	55.84
Bra005991.1-P	Field mustard	cytosol	62.59	54.08
CDY60226	Canola	cytosol	62.59	53.92
PGSC0003DMT400031818	Potato	plastid	57.34	53.59
AT5G08400.1	Thale cress	plastid	61.54	52.85
EES06656	Sorghum	plastid	35.31	34.47

Protein Annotations

EnsemblPlants:EES07795	EnsemblPlantsGene:SORBI_3004G353900	EntrezGene:8084450	InterPro:DUF3531	PANTHER:PTHR33102	PANTHER:PTHR33102:SF13
PFAM:PF12049	ProteinID:EES07795	ProteinID:EES07795.1	RefSeq:XP_002454819.1	SEG:seg	unigene:Sbi.8075
UniParc:UPI0001A86159	UniProt:C5XWN2	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:68186369..68189893

Molecular Weight (calculated)

32488.6 Da

IEP (calculated)

7.215

GRAVY (calculated)

-0.487

Length

286 amino acids

Sequence
(BLAST)

001: MSRLLPPAKT LLLSPFPMFS PPAPHLLLHL PRIHIRTSAG RGGASENAAA SGTTARDRRL VKVREERRRR EYDREHTYPG WAKVLENACR DDEELRAILG
101: DSIGNPELMK QRIQERVRKK GRAQFNKSKT GSIVAFKVSF RDFNPLNSFI WFEFFGEPTD RDVDLLGGVI QAWYVMGRLG AYNSSNLQLA NSMMDYDPSY
201: DSEEASTVMP SSFHDISDVE FQDNWARVWV DLGTSDYLGL DVLLNCLTQL SSEHLGIKQV VFGGKKMGDW EEGMTSSDYG YKHFKI

Best Arabidopsis Sequence Match ( AT5G08400.2 )
(BLAST)

001: MYENNLLTLS SCTMNLNFAF SPFLVSQRQP FSSHKRNLHT LVAVSANSDN LAGEDNGGIS AANKGSGTTA RGRRLLKVRE EKRKRDYDRL HDYPSWAKVL
101: ESACKDDEEL RAVLGDSIGN PELMRKKVEE RVRKKGKDFQ KQKTGSVLSF KVNFRDFNPV DSFIWFELYG TPSDRDVDLI GSVIQAWYVM GRLGAFNTSN
201: LQLANTSLEY DPLYDAEKGF KVMPSSFHDI SDVEFQDNWG RVWVDLGTSD IFALDVLLNC LTVMSSEYLG IQQVVFGGKR MGDWEEGMTN PDFGYKYFKI

Arabidopsis Description

At5g08400/F8L15_130 [Source:UniProtKB/TrEMBL;Acc:Q8VZD1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.