Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- plasma membrane 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY44774 | Canola | cytosol | 22.71 | 77.42 |
| OQU85906 | Sorghum | cytosol | 11.67 | 75.51 |
| VIT_10s0071g01140.t01 | Wine grape | nucleus | 66.88 | 71.38 |
| Solyc08g081080.2.1 | Tomato | cytosol | 61.51 | 70.4 |
| CDX81102 | Canola | endoplasmic reticulum, vacuole | 64.35 | 68.46 |
| Bra028658.1-P | Field mustard | plastid | 64.04 | 67.67 |
| CDY40748 | Canola | plastid | 62.46 | 67.58 |
| KRH64843 | Soybean | nucleus | 63.72 | 66.45 |
| KRG93163 | Soybean | nucleus | 62.46 | 65.78 |
| Os02t0827600-01 | Rice | mitochondrion | 55.84 | 64.13 |
| PGSC0003DMT400031818 | Potato | plastid | 61.83 | 64.05 |
| Zm00001d051851_P005 | Maize | plastid | 56.15 | 64.03 |
| TraesCS6B01G408300.1 | Wheat | mitochondrion, plastid | 54.89 | 61.92 |
| EES07795 | Sorghum | plastid | 55.84 | 61.89 |
| CDY60226 | Canola | cytosol | 64.35 | 61.45 |
| Bra005991.1-P | Field mustard | cytosol | 64.04 | 61.33 |
| TraesCS6D01G355200.1 | Wheat | plastid | 55.84 | 61.25 |
| TraesCS6A01G371300.1 | Wheat | plastid | 54.26 | 61.21 |
| AT5G08400.1 | Thale cress | plastid | 63.72 | 60.66 |
| HORVU6Hr1G087420.4 | Barley | plastid | 54.89 | 59.18 |
| GSMUA_Achr8P24980_001 | Banana | plastid | 32.18 | 31.29 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P00100_001 | EnsemblPlants:GSMUA_Achr3T00100_001 | EnsemblPlantsGene:GSMUA_Achr3G00100_001 | InterPro:DUF3531 | PANTHER:PTHR33102 | PANTHER:PTHR33102:SF13 |
| PFAM:PF12049 | SEG:seg | UniParc:UPI0002967B1B | UniProt:M0SAH8 | MapMan:35.2 | : |
Description
oxidoreductase/ transition metal ion binding protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G00100_001]
Coordinates
chr3:-:141632..146091
Molecular Weight (calculated)
35569.9 Da
IEP (calculated)
7.370
GRAVY (calculated)
-0.506
Length
317 amino acids
Sequence
(BLAST)
(BLAST)
001: MLAGGFLPSP FPAFSRSPPL PYALSRNCLR SCNSRHVLSH CAQNRGSSRT CIATRAAVSR GEDDDEEKEG EGDGRSPGAA KGSGTSARGR RLLKVREEKR
101: KREYDRILNY PSWAKILENA CKDDAELRAV LGDSIGNPEL MRKRVEERVR TKGRDFRKSK TGSVLAFKVS FRDFNPLDSF IWFELYGAPS DRDVDLLGSV
201: IQSWYVMGRL GAFDSSNLQL ANSSMDYNPL YDSDKAVQSM SSSFHDIGDV EFQDNWGRVW VDLGTSDFFA VDVLLNCLTV LSSEYLGIQQ VVFGGRRMGD
301: WEEGMMSAEY GYKHFKI
101: KREYDRILNY PSWAKILENA CKDDAELRAV LGDSIGNPEL MRKRVEERVR TKGRDFRKSK TGSVLAFKVS FRDFNPLDSF IWFELYGAPS DRDVDLLGSV
201: IQSWYVMGRL GAFDSSNLQL ANSSMDYNPL YDSDKAVQSM SSSFHDIGDV EFQDNWGRVW VDLGTSDFFA VDVLLNCLTV LSSEYLGIQQ VVFGGRRMGD
301: WEEGMMSAEY GYKHFKI
001: MYENNLLTLS SCTMNLNFAF SPFLVSQRQP FSSHKRNLHT LVAVSANSDN LAGEDNGGIS AANKGSGTTA RGRRLLKVRE EKRKRDYDRL HDYPSWAKVL
101: ESACKDDEEL RAVLGDSIGN PELMRKKVEE RVRKKGKDFQ KQKTGSVLSF KVNFRDFNPV DSFIWFELYG TPSDRDVDLI GSVIQAWYVM GRLGAFNTSN
201: LQLANTSLEY DPLYDAEKGF KVMPSSFHDI SDVEFQDNWG RVWVDLGTSD IFALDVLLNC LTVMSSEYLG IQQVVFGGKR MGDWEEGMTN PDFGYKYFKI
101: ESACKDDEEL RAVLGDSIGN PELMRKKVEE RVRKKGKDFQ KQKTGSVLSF KVNFRDFNPV DSFIWFELYG TPSDRDVDLI GSVIQAWYVM GRLGAFNTSN
201: LQLANTSLEY DPLYDAEKGF KVMPSSFHDI SDVEFQDNWG RVWVDLGTSD IFALDVLLNC LTVMSSEYLG IQQVVFGGKR MGDWEEGMTN PDFGYKYFKI
Arabidopsis Description
At5g08400/F8L15_130 [Source:UniProtKB/TrEMBL;Acc:Q8VZD1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.