Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU85906 | Sorghum | cytosol | 16.01 | 91.84 |
| TraesCS6B01G408300.1 | Wheat | mitochondrion, plastid | 91.81 | 91.81 |
| HORVU6Hr1G087420.4 | Barley | plastid | 94.66 | 90.48 |
| TraesCS6D01G355200.1 | Wheat | plastid | 91.81 | 89.27 |
| Zm00001d051851_P005 | Maize | plastid | 79.0 | 79.86 |
| EES07795 | Sorghum | plastid | 80.43 | 79.02 |
| Os02t0827600-01 | Rice | mitochondrion | 76.16 | 77.54 |
| CDY44774 | Canola | cytosol | 21.0 | 63.44 |
| CDX81102 | Canola | endoplasmic reticulum, vacuole | 60.5 | 57.05 |
| Solyc08g081080.2.1 | Tomato | cytosol | 56.23 | 57.04 |
| CDY40748 | Canola | plastid | 59.43 | 57.0 |
| Bra028658.1-P | Field mustard | plastid | 59.79 | 56.0 |
| VIT_10s0071g01140.t01 | Wine grape | nucleus | 58.72 | 55.56 |
| KRG93163 | Soybean | nucleus | 58.36 | 54.49 |
| KRH64843 | Soybean | nucleus | 58.72 | 54.28 |
| GSMUA_Achr3P00100_001 | Banana | plastid | 61.21 | 54.26 |
| PGSC0003DMT400031818 | Potato | plastid | 56.23 | 51.63 |
| AT5G08400.1 | Thale cress | plastid | 60.14 | 50.75 |
| Bra005991.1-P | Field mustard | cytosol | 59.07 | 50.15 |
| CDY60226 | Canola | cytosol | 58.72 | 49.7 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G371300.1 | EnsemblPlantsGene:TraesCS6A01G371300 | InterPro:DUF3531 | PANTHER:PTHR33102 | PANTHER:PTHR33102:SF13 | PFAM:PF12049 |
| SEG:seg | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr6A:+:595624970..595627633
Molecular Weight (calculated)
31425.1 Da
IEP (calculated)
6.802
GRAVY (calculated)
-0.452
Length
281 amino acids
Sequence
(BLAST)
(BLAST)
001: MPLLAPAAKT LFPSRLPPSP RLHLRRAIAT AAGGRGDGAA AVSAASGTSA RDRRLARVRE ERRRREYDRE HTYPGWARVL ENACRDDEEM RAILGDSIGN
101: PELMKQRIQE RVRAKGREGF NRPKTGSVAA FKVSFRDFNP LNAFIWFELF GEPTDRDVDL LGGVIQAWYV MGRLGAFNSS NLQLANSMLD FDPSYDSEEA
201: SAVMPSSFHD ISDVEFQDSW GRVWVDLGTS DHLGLDVLLN CLTQLSSEHL GIKQVVFGGR KLGDWEEGMT SSDYGYKHFK I
101: PELMKQRIQE RVRAKGREGF NRPKTGSVAA FKVSFRDFNP LNAFIWFELF GEPTDRDVDL LGGVIQAWYV MGRLGAFNSS NLQLANSMLD FDPSYDSEEA
201: SAVMPSSFHD ISDVEFQDSW GRVWVDLGTS DHLGLDVLLN CLTQLSSEHL GIKQVVFGGR KLGDWEEGMT SSDYGYKHFK I
001: MYENNLLTLS SCTMNLNFAF SPFLVSQRQP FSSHKRNLHT LVAVSANSDN LAGEDNGGIS AANKGSGTTA RGRRLLKVRE EKRKRDYDRL HDYPSWAKVL
101: ESACKDDEEL RAVLGDSIGN PELMRKKVEE RVRKKGKDFQ KQKTGSVLSF KVNFRDFNPV DSFIWFELYG TPSDRDVDLI GSVIQAWYVM GRLGAFNTSN
201: LQLANTSLEY DPLYDAEKGF KVMPSSFHDI SDVEFQDNWG RVWVDLGTSD IFALDVLLNC LTVMSSEYLG IQQVVFGGKR MGDWEEGMTN PDFGYKYFKI
101: ESACKDDEEL RAVLGDSIGN PELMRKKVEE RVRKKGKDFQ KQKTGSVLSF KVNFRDFNPV DSFIWFELYG TPSDRDVDLI GSVIQAWYVM GRLGAFNTSN
201: LQLANTSLEY DPLYDAEKGF KVMPSSFHDI SDVEFQDNWG RVWVDLGTSD IFALDVLLNC LTVMSSEYLG IQQVVFGGKR MGDWEEGMTN PDFGYKYFKI
Arabidopsis Description
At5g08400/F8L15_130 [Source:UniProtKB/TrEMBL;Acc:Q8VZD1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.