Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- cytosol 1
- peroxisome 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY43498 | Canola | plastid | 98.65 | 98.65 |
| VIT_11s0016g02630.t01 | Wine grape | cytosol | 51.69 | 76.88 |
| AT4G29400.1 | Thale cress | plastid | 74.32 | 72.85 |
| Solyc10g045310.1.1 | Tomato | nucleus | 54.73 | 70.74 |
| PGSC0003DMT400074006 | Potato | cytosol, mitochondrion | 56.76 | 56.38 |
| GSMUA_Achr8P24980_001 | Banana | plastid | 55.41 | 50.31 |
| Zm00001d011166_P001 | Maize | plastid | 48.65 | 49.83 |
| Os01t0558800-01 | Rice | plastid | 47.3 | 49.82 |
| KRH44778 | Soybean | plastid | 52.7 | 49.68 |
| TraesCS3D01G206900.1 | Wheat | plastid | 44.59 | 47.83 |
| KRH37622 | Soybean | nucleus | 51.69 | 47.52 |
| EES06656 | Sorghum | plastid | 46.96 | 47.44 |
| TraesCSU01G050100.1 | Wheat | plastid | 34.46 | 45.54 |
| HORVU3Hr1G048210.5 | Barley | plastid | 36.15 | 37.68 |
| Bra028658.1-P | Field mustard | plastid | 29.73 | 29.33 |
| Bra005991.1-P | Field mustard | cytosol | 31.08 | 27.79 |
Protein Annotations
Description
AT4G29400 (E=4e-132) | unknown protein
Coordinates
chrA01:-:3850084..3851566
Molecular Weight (calculated)
34223.3 Da
IEP (calculated)
5.481
GRAVY (calculated)
-0.679
Length
296 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSFQCSLHL LQPYCSASYN NHSNLRFHNL APFRVTRTIQ APKIQRVRAD WSRRSVKVRV NGLNREMEEE EEDVEESEEE DEFTSRKRES YGGKKEDINY
101: DKDPEFADIL GDCLDNPEKA QKKMEERLRK KRNKILHTKT GSATSMQVTF NKFEYSNSYM WLEFHNAPLD KDIALITDAI RSWHILGRLG GYNSMNMQLS
201: QAPVDKRPNY DAILGANIEP TTFYNIGDLE VQDNVARIWL DIGTSEPLIL DVLINALTQI SSDYVGIKKV VFGGSEFENW KENLTSEESG FRVHKI
101: DKDPEFADIL GDCLDNPEKA QKKMEERLRK KRNKILHTKT GSATSMQVTF NKFEYSNSYM WLEFHNAPLD KDIALITDAI RSWHILGRLG GYNSMNMQLS
201: QAPVDKRPNY DAILGANIEP TTFYNIGDLE VQDNVARIWL DIGTSEPLIL DVLINALTQI SSDYVGIKKV VFGGSEFENW KENLTSEESG FRVHKI
001: MLRFQCFLHL LQPSMAKNNS NHSNICLHNL APFRVTDTIP VQKIQELRAN RSRESGKLRV NGIGREMEEG VEEFEEVDDG DDDEVEDEFS AKKRGVYRAK
101: KEKIDYDKDP EFADILGDCL DNPDKAQKKM EERLRKKRNK ILHTKTGSAT SMPVTFNKFE YSNSYMWLEF YNTPLDKDIA LISDTIRSWH ILGRLGGYNS
201: MNMQLSQAPL DKRPNYDAIL GANVEPTTFY NIGDLEVQDN VARIWLDIGT SEPLILDVLI NALTQISSDY VGIKKVVFGG SEFESWKENM TSEESGFRVH
301: KI
101: KEKIDYDKDP EFADILGDCL DNPDKAQKKM EERLRKKRNK ILHTKTGSAT SMPVTFNKFE YSNSYMWLEF YNTPLDKDIA LISDTIRSWH ILGRLGGYNS
201: MNMQLSQAPL DKRPNYDAIL GANVEPTTFY NIGDLEVQDN VARIWLDIGT SEPLILDVLI NALTQISSDY VGIKKVVFGG SEFESWKENM TSEESGFRVH
301: KI
Arabidopsis Description
Oxidoreductase/transition metal ion-binding protein (DUF3531) [Source:UniProtKB/TrEMBL;Acc:Q5XV66]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.