Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G46080.1 | Thale cress | nucleus | 87.5 | 89.63 |
| AT5G59820.1 | Thale cress | nucleus | 63.69 | 66.05 |
| AT3G46070.1 | Thale cress | nucleus | 66.67 | 65.88 |
| PGSC0003DMT400040143 | Potato | nucleus | 42.26 | 42.77 |
| PGSC0003DMT400040144 | Potato | nucleus | 41.67 | 42.42 |
| Solyc06g075780.1.1 | Tomato | nucleus | 38.69 | 42.21 |
| AT2G28710.1 | Thale cress | nucleus | 38.69 | 41.67 |
| Solyc11g073060.1.1 | Tomato | nucleus | 37.5 | 40.91 |
| PGSC0003DMT400040141 | Potato | nucleus | 41.07 | 40.59 |
| PGSC0003DMT400040206 | Potato | nucleus | 41.07 | 40.35 |
| KRH29844 | Soybean | nucleus, plastid | 34.52 | 40.28 |
| PGSC0003DMT400077934 | Potato | cytosol, nucleus, plastid | 39.29 | 40.24 |
| PGSC0003DMT400040142 | Potato | nucleus | 39.29 | 40.0 |
| KRH24840 | Soybean | nucleus | 35.71 | 38.46 |
| PGSC0003DMT400040207 | Potato | nucleus | 37.5 | 38.41 |
| KRH23029 | Soybean | nucleus | 38.69 | 38.01 |
| KRH10294 | Soybean | nucleus | 37.5 | 36.63 |
| AT2G37430.1 | Thale cress | nucleus | 36.31 | 34.27 |
| AT3G53600.1 | Thale cress | nucleus | 31.55 | 30.29 |
| AT2G28200.1 | Thale cress | nucleus | 32.74 | 19.23 |
| AT5G03510.1 | Thale cress | nucleus | 33.33 | 19.18 |
| AT5G04390.1 | Thale cress | nucleus | 32.14 | 14.92 |
| AT3G10470.1 | Thale cress | nucleus | 32.14 | 13.57 |
Protein Annotations
| MapMan:15.5.15 | Gene3D:3.30.160.60 | EntrezGene:823752 | UniProt:A0A178VI57 | EMBL:AB493641 | ProteinID:AEE78112.1 |
| ArrayExpress:AT3G46090 | EnsemblPlantsGene:AT3G46090 | RefSeq:AT3G46090 | TAIR:AT3G46090 | RefSeq:AT3G46090-TAIR-G | EnsemblPlants:AT3G46090.1 |
| TAIR:AT3G46090.1 | EMBL:BT024870 | ProteinID:CAA67235.1 | ProteinID:CAB90936.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 | GO:GO:0006979 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009987 | GO:GO:0010200 | GO:GO:0040007 |
| GO:GO:0045926 | GO:GO:0046872 | InterPro:IPR013087 | RefSeq:NP_190195.1 | ProteinID:OAP05474.1 | PFAM:PF13912 |
| PO:PO:0000293 | ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF318 | UniProt:Q42453 |
| SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI00000A170C | EMBL:X98676 | Symbol:ZAT7 | InterPro:Znf_C2H2_sf |
| InterPro:Znf_C2H2_type | SEG:seg | : | : | : | : |
Description
ZAT7ZAT7 [Source:UniProtKB/TrEMBL;Acc:A0A178VI57]
Coordinates
chr3:-:16925881..16926883
Molecular Weight (calculated)
18360.3 Da
IEP (calculated)
9.253
GRAVY (calculated)
-0.258
Length
168 amino acids
Sequence
(BLAST)
(BLAST)
001: MVARSEEIVI VEEDTTAKCL MLLSRVGECG GGCGGDERVF RCKTCLKEFS SFQALGGHRA SHKKLINSDN PSLLGSLSNK KTKTSHPCPI CGVKFPMGQA
101: LGGHMRRHRN EKVSGSLVTR SFLPETTTVT ALKKFSSGKR VACLDLDLDS MESLVNWKLE LGRTISWS
101: LGGHMRRHRN EKVSGSLVTR SFLPETTTVT ALKKFSSGKR VACLDLDLDS MESLVNWKLE LGRTISWS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.