Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra029843.1-P | Field mustard | nucleus | 72.36 | 88.62 |
| CDY08602 | Canola | nucleus | 75.13 | 88.46 |
| CDY00945 | Canola | nucleus | 74.62 | 87.87 |
| CDY41350 | Canola | nucleus, plastid | 55.28 | 87.3 |
| Bra034116.1-P | Field mustard | plastid | 60.8 | 87.05 |
| AT5G04390.1 | Thale cress | nucleus | 64.32 | 70.72 |
| HORVU3Hr1G057300.1 | Barley | nucleus | 8.29 | 47.83 |
| HORVU5Hr1G095320.1 | Barley | nucleus | 8.29 | 47.83 |
| HORVU2Hr1G122100.1 | Barley | nucleus, plastid | 8.79 | 45.45 |
| HORVU4Hr1G082500.1 | Barley | nucleus | 7.79 | 44.93 |
| HORVU1Hr1G012760.1 | Barley | nucleus | 7.79 | 44.93 |
| VIT_08s0007g04770.t01 | Wine grape | nucleus | 30.15 | 43.48 |
| KRH67769 | Soybean | nucleus | 23.12 | 42.59 |
| AT2G28200.1 | Thale cress | nucleus | 30.15 | 41.96 |
| GSMUA_Achr1P03310_001 | Banana | nucleus | 17.34 | 41.32 |
| PGSC0003DMT400009871 | Potato | nucleus | 30.4 | 40.6 |
| HORVU5Hr1G095330.1 | Barley | nucleus | 7.79 | 40.26 |
| HORVU5Hr1G095390.1 | Barley | nucleus | 7.79 | 40.26 |
| AT2G28710.1 | Thale cress | nucleus | 15.58 | 39.74 |
| Solyc09g008440.1.1 | Tomato | nucleus | 30.65 | 39.35 |
| HORVU1Hr1G020710.1 | Barley | nucleus | 7.54 | 38.96 |
| KRH19960 | Soybean | nucleus | 27.89 | 38.54 |
| AT2G37430.1 | Thale cress | nucleus | 17.09 | 38.2 |
| AT5G03510.1 | Thale cress | nucleus | 27.89 | 38.01 |
| KRH32562 | Soybean | nucleus | 28.14 | 37.58 |
| Zm00001d036330_P001 | Maize | nucleus | 21.86 | 35.37 |
| AT5G59820.1 | Thale cress | nucleus | 14.32 | 35.19 |
| AT3G53600.1 | Thale cress | nucleus | 15.08 | 34.29 |
| AT3G46080.1 | Thale cress | nucleus | 14.07 | 34.15 |
| KXG20985 | Sorghum | nucleus, plastid | 23.37 | 33.82 |
| AT3G46090.1 | Thale cress | nucleus | 13.57 | 32.14 |
| AT3G46070.1 | Thale cress | nucleus | 13.57 | 31.76 |
| KRG96047 | Soybean | mitochondrion | 27.89 | 30.75 |
| Zm00001d004439_P001 | Maize | nucleus | 27.64 | 30.64 |
| HORVU6Hr1G092750.1 | Barley | nucleus | 27.64 | 30.47 |
| Zm00001d051865_P001 | Maize | nucleus | 25.13 | 30.3 |
| TraesCS6A01G404600.1 | Wheat | nucleus | 27.89 | 30.25 |
| Os02t0823900-00 | Rice | cytosol, nucleus, peroxisome | 26.13 | 30.23 |
| Os04t0162500-01 | Rice | vacuole | 21.86 | 30.1 |
| TraesCS6B01G448900.1 | Wheat | nucleus | 27.39 | 29.86 |
| TraesCS6D01G387900.1 | Wheat | nucleus | 27.39 | 29.78 |
| TraesCS2A01G002400.1 | Wheat | nucleus | 25.13 | 29.24 |
| Zm00001d024866_P001 | Maize | nucleus | 26.13 | 28.42 |
| TraesCS2B01G020300.1 | Wheat | nucleus | 25.63 | 27.95 |
| EES10410 | Sorghum | nucleus | 27.39 | 27.18 |
| EES07783 | Sorghum | nucleus | 26.13 | 26.6 |
Protein Annotations
| MapMan:15.5.15 | EntrezGene:820211 | UniProt:A0A178V8M6 | ProteinID:AAF76348.1 | ProteinID:AAG51397.1 | EMBL:AB493608 |
| ProteinID:AEE74911.1 | ArrayExpress:AT3G10470 | EnsemblPlantsGene:AT3G10470 | RefSeq:AT3G10470 | TAIR:AT3G10470 | RefSeq:AT3G10470-TAIR-G |
| EnsemblPlants:AT3G10470.1 | TAIR:AT3G10470.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009555 |
| GO:GO:0009987 | InterPro:IPR013087 | RefSeq:NP_187658.1 | ProteinID:OAP02041.1 | PFAM:PF13912 | PO:PO:0001016 |
| PO:PO:0001017 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF325 |
| UniProt:Q7G8T1 | SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI00000AB949 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type |
| SEG:seg | : | : | : | : | : |
Description
C2H2-type zinc finger family protein [Source:UniProtKB/TrEMBL;Acc:Q7G8T1]
Coordinates
chr3:+:3260141..3261854
Molecular Weight (calculated)
42995.8 Da
IEP (calculated)
7.950
GRAVY (calculated)
-0.747
Length
398 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAAAEAVSA AREQSLILKG KRTKRQRPQS PIPFSIIPPM SSHEPDAEEE STSLVSKEKS LNDEINNNNI KNNNNTLING VTSSSSASSS SNNNATLKAT
101: ADEEDQDMAN CLILLAQGHS LPHLQPQPHP QQQTRQLMMS YQDSGNNNNN AYRSSSRRFL ETSSSNGTTT NGGGGRAGYY VYQCKTCDRT FPSFQALGGH
201: RASHKKPKAA MGLHSNHDHK KSNYDDAVSL HLNNVLTTTP NNNSNHRSLV VYGKGSNNKV HECGICGAEF TSGQALGGHM RRHRGAVVAA AAASTATVSV
301: AAIPATANTA LSLSPMSFDQ MSEGPIQAPV KRARSAVVSL DLDLNLPAPE DENRVNGLSF ASKQEHEQEH EQTQQKKQRE EQKSLVLSSA PTLVDCHY
101: ADEEDQDMAN CLILLAQGHS LPHLQPQPHP QQQTRQLMMS YQDSGNNNNN AYRSSSRRFL ETSSSNGTTT NGGGGRAGYY VYQCKTCDRT FPSFQALGGH
201: RASHKKPKAA MGLHSNHDHK KSNYDDAVSL HLNNVLTTTP NNNSNHRSLV VYGKGSNNKV HECGICGAEF TSGQALGGHM RRHRGAVVAA AAASTATVSV
301: AAIPATANTA LSLSPMSFDQ MSEGPIQAPV KRARSAVVSL DLDLNLPAPE DENRVNGLSF ASKQEHEQEH EQTQQKKQRE EQKSLVLSSA PTLVDCHY
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.