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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • mitochondrion 1
PPI
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc01g056940.2.1 Tomato nucleus 99.36 99.36
PGSC0003DMT400011939 Potato cytosol 98.72 98.72
VIT_17s0119g00050.t01 Wine grape cytosol 98.08 98.08
GSMUA_Achr8P22260_001 Banana cytosol 96.79 96.18
GSMUA_Achr3P08430_001 Banana cytosol 96.79 96.18
KRH11776 Soybean nucleus 95.51 96.13
KRH69588 Soybean nucleus 94.87 95.48
KRH74571 Soybean cytosol 94.87 95.48
GSMUA_AchrUn_... Banana cytosol 95.51 94.9
KRH36782 Soybean nucleus 94.23 94.84
TraesCS1A01G397400.1 Wheat cytosol 94.23 94.84
TraesCS1B01G425700.1 Wheat cytosol 94.23 94.84
TraesCS1D01G405400.1 Wheat cytosol 94.23 94.84
CDY50916 Canola cytosol 94.87 94.27
CDX83344 Canola cytosol 94.87 94.27
TraesCS1A01G105400.1 Wheat cytosol 93.59 94.19
Os05t0160200-01 Rice nucleus 93.59 94.19
Os01t0328400-01 Rice nucleus 93.59 94.19
EES02888 Sorghum cytosol 93.59 94.19
EES17768 Sorghum cytosol 93.59 94.19
TraesCS1A01G397500.1 Wheat golgi, unclear 93.59 94.19
TraesCS1B01G130900.1 Wheat cytosol 93.59 94.19
TraesCS1D01G109800.1 Wheat cytosol 93.59 94.19
AT2G47110.1 Thale cress cytosol 94.23 93.63
CDY25100 Canola cytosol 94.23 93.63
CDY66301 Canola cytosol 94.23 93.63
CDY11410 Canola cytosol 94.23 93.63
CDX93983 Canola cytosol 94.23 93.63
CDX76623 Canola cytosol 94.23 93.63
CDX67885 Canola cytosol 94.23 93.63
AT3G62250.1 Thale cress cytosol 93.59 92.99
CDY12472 Canola cytosol 90.38 90.38
CDY25783 Canola cytosol 90.38 90.38
CDY44146 Canola cytosol 90.38 90.38
AT1G23410.1 Thale cress cytosol 89.74 89.74
CDY04715 Canola cytosol 89.74 89.74
HORVU1Hr1G023660.1 Barley extracellular 93.59 81.56
PGSC0003DMT400011737 Potato cytosol 92.31 79.56
PGSC0003DMT400013958 Potato cytosol 53.85 65.62
PGSC0003DMT400031900 Potato cytosol 53.85 65.62
PGSC0003DMT400000364 Potato cytosol 53.85 65.62
PGSC0003DMT400047686 Potato cytosol 53.85 65.62
PGSC0003DMT400015022 Potato cytosol 53.85 64.12
PGSC0003DMT400029234 Potato cytosol 55.13 55.84
Zm00001d032616_P001 Maize plastid 53.85 53.85
PGSC0003DMT400057275 Potato cytosol 53.21 43.68
HORVU1Hr1G087690.8 Barley nucleus 73.72 42.91
PGSC0003DMT400027156 Potato cytosol 60.26 24.67
PGSC0003DMT400037401 Potato cytosol 59.62 24.28
PGSC0003DMT400089149 Potato cytosol 60.26 20.57
PGSC0003DMT400010171 Potato cytosol 55.13 16.1
PGSC0003DMT400037403 Potato cytosol 53.85 15.76
PGSC0003DMT400033485 Potato cytosol 16.03 12.08
Protein Annotations
MapMan:17.1.3.1.29Gene3D:2.20.25.660Gene3D:3.10.20.90ProteinID:AAA19247ProteinID:AAA19247.1ProteinID:ABY21245
ProteinID:ABY21245.1ProteinID:ADO17492ProteinID:ADO17492.1ProteinID:CAA77735ProteinID:CAA77735.1ProteinID:CAA77737
ProteinID:CAA77737.1ProteinID:CAA77738ProteinID:CAA77738.1EMBL:EU294350GO:GO:0003674GO:GO:0003735
GO:GO:0005198GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005634GO:GO:0005737GO:GO:0005840GO:GO:0006412GO:GO:0008150GO:GO:0008152
GO:GO:0009058GO:GO:0009987GO:GO:0019538GO:GO:0030529GO:GO:0046872EMBL:HM439286
InterPro:IPR000626InterPro:IPR038582EMBL:L22576UniProt:P62981PFAM:PF00240PFAM:PF01599
EnsemblPlantsGene:PGSC0003DMG400005199PGSC:PGSC0003DMG400005199EnsemblPlants:PGSC0003DMT400013321PRINTS:PR00348ScanProsite:PS00299PFscan:PS50053
PANTHER:PTHR10666PANTHER:PTHR10666:SF257InterPro:Ribosomal_S27aInterPro:Ribosomal_zn-bdInterPro:S27a-like_sfSMART:SM00213
SMART:SM01402SUPFAM:SSF54236SUPFAM:SSF57829UniParc:UPI000016DE25InterPro:UbiquitinInterPro:Ubiquitin-like_domsf
InterPro:Ubiquitin_CSInterPro:Ubiquitin_domEMBL:Z11669EMBL:Z11671EMBL:Z11672SEG:seg
Description
UBI3Ubiquitin-40S ribosomal protein S27a [Source:UniProtKB/Swiss-Prot;Acc:P62981]
Coordinates
chr1:-:63211724..63212425
Molecular Weight (calculated)
17702.6 Da
IEP (calculated)
10.438
GRAVY (calculated)
-0.758
Length
156 amino acids
Sequence
(BLAST)
001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGAKKR KKKTYTKPKK IKHKKKKVKL
101: AVLQFYKVDD TGKVQRLRKE CPNAECGAGT FMANHFDRHY CGKCGLTYVY NKAGGD
Best Arabidopsis Sequence Match ( AT2G47110.1 )
(BLAST)
001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGAKKR KKKTYTKPKK IKHKHKKVKL
101: AVLQFYKVDG SGKVQRLRKE CPNATCGAGT FMASHFDRHY CGKCGLTYVY QKEGAQE
Arabidopsis Description
RPS27ABUBQ6 [Source:UniProtKB/TrEMBL;Acc:A0A178VYW3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.